Variant report

Variant	rs200814490
Chromosome Location	chr10:112838436-112838437
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:112837126..112840004-chr10:112842044..112844644,2	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498045	chr10:112794518-113353550	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv825566	chr10:112830014-112871333	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv527400	chr10:112833561-112843085	Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Active TSS Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv896004	chr10:112834763-112842961	Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3321787	chr10:112835962-112840760	Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv896005	chr10:112835992-112846298	Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3377744	chr10:112837487-112840335	Bivalent/Poised TSS Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3426722	chr10:112837812-112839710	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112835600-112839000	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
2	chr10:112835600-112839000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
3	chr10:112835800-112840400	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr10:112836000-112839200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:112836800-112839200	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
6	chr10:112837000-112839400	Bivalent/Poised TSS	Fetal Brain Female	brain
7	chr10:112837200-112839600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
8	chr10:112837600-112838600	Flanking Bivalent TSS/Enh	Esophagus	oesophagus
9	chr10:112837600-112839000	Flanking Bivalent TSS/Enh	Right Ventricle	heart
10	chr10:112837600-112839600	Bivalent Enhancer	Placenta	Placenta
11	chr10:112837800-112838600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr10:112837800-112838600	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:112837800-112838600	Flanking Active TSS	Ovary	ovary
14	chr10:112838000-112839000	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr10:112838000-112839000	Bivalent Enhancer	Fetal Heart	heart
16	chr10:112838000-112839200	ZNF genes & repeats	Gastric	stomach
17	chr10:112838000-112839600	Bivalent Enhancer	ES-UCSF4 Cell Line	embryonic stem cell
18	chr10:112838000-112839600	Transcr. at gene 5' and 3'	Pancreas	Pancrea
19	chr10:112838200-112838800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr10:112838200-112839000	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr10:112838200-112839000	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
22	chr10:112838200-112839200	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
23	chr10:112838400-112838600	Flanking Active TSS	Primary hematopoietic stem cells	blood
24	chr10:112838400-112838600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
25	chr10:112838400-112838600	Bivalent Enhancer	Fetal Intestine Large	intestine
26	chr10:112838400-112838600	Bivalent Enhancer	Fetal Muscle Trunk	muscle
27	chr10:112838400-112838600	Bivalent Enhancer	Fetal Muscle Leg	muscle
28	chr10:112838400-112838600	Active TSS	Right Atrium	heart
29	chr10:112838400-112838600	Bivalent/Poised TSS	Thymus	Thymus
30	chr10:112838400-112838800	Transcr. at gene 5' and 3'	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr10:112838400-112838800	Bivalent/Poised TSS	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr10:112838400-112838800	Active TSS	Adipose Nuclei	Adipose
33	chr10:112838400-112838800	Active TSS	Psoas Muscle	Psoas
34	chr10:112838400-112838800	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
35	chr10:112838400-112839000	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr10:112838400-112839000	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
37	chr10:112838400-112839000	Active TSS	Duodenum Mucosa	Duodenum
38	chr10:112838400-112839000	Bivalent Enhancer	Lung	lung
39	chr10:112838400-112839200	Bivalent/Poised TSS	Brain Germinal Matrix	brain
40	chr10:112838400-112839200	Active TSS	Colonic Mucosa	Colon
41	chr10:112838400-112839400	ZNF genes & repeats	Spleen	Spleen
42	chr10:112838400-112840400	Bivalent Enhancer	Fetal Stomach	stomach
43	chr10:112838400-112847200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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