| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv909285 |
chr18:10001-196829 |
Strong transcription ZNF genes & repeats Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv21286 |
chr18:10657-105963 |
ZNF genes & repeats Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1059917 |
chr18:11543-175067 |
Strong transcription Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1059509 |
chr18:11543-190140 |
Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1064673 |
chr18:11543-249310 |
Strong transcription Weak transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv1061730 |
chr18:11543-322183 |
Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1059645 |
chr18:11543-326679 |
Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv909286 |
chr18:12842-139767 |
Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv576227 |
chr18:52933-322183 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
22 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv1064150 |
chr18:99036-321710 |
Genic enhancers Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
20 gene(s)
|
inside rSNPs
|
diseases
|
| 11 |
nsv978591 |
chr18:99679-113640 |
ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
esv20269 |
chr18:101422-105963 |
ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
esv3418526 |
chr18:103752-113650 |
Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
esv3390502 |
chr18:103852-113550 |
ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
esv3358628 |
chr18:104052-113750 |
Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 16 |
esv3402094 |
chr18:104152-113850 |
Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 17 |
esv3346292 |
chr18:104452-113650 |
ZNF genes & repeats Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers
|
TF binding regionCpG islandChromatin interactive regionmiRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page:
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