| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv877017 |
chr3:77881397-78670654 |
Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv529995 |
chr3:78188643-78739698 |
Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
11 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1008156 |
chr3:78444137-78765884 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv2757000 |
chr3:78453937-78497118 |
Enhancers Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
esv2759159 |
chr3:78453937-78497118 |
Weak transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv1014636 |
chr3:78464695-78491410 |
ZNF genes & repeats Enhancers Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 7 |
nsv1006674 |
chr3:78472060-78491410 |
Weak transcription Enhancers ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 8 |
nsv1006588 |
chr3:78481969-78497520 |
Weak transcription ZNF genes & repeats Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
n/a
|
| 9 |
nsv1002258 |
chr3:78481969-78532178 |
Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
