Variant report

Variant	rs200845641
Chromosome Location	chr14:81644948-81644949
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:6)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:81639700..81642191-chr14:81644635..81646691,2	K562	blood:
2	chr14:81643515..81648900-chr14:81684307..81689030,7	K562	blood:
3	chr14:81643246..81655314-chr14:81683241..81689401,24	K562	blood:
4	chr14:81644106..81646643-chr14:81658404..81660204,2	MCF-7	breast:
5	chr14:81644812..81647166-chr14:81685708..81688180,2	MCF-7	breast:
6	chr14:81644138..81645856-chr14:81700213..81702978,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-STON2-5	chr14:81641799-81645528	NONHSAT038052

No data

Variant related genes	Relation type
ENSG00000165417	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832841	chr14:81588322-81743921	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	86 gene(s)	inside rSNPs	diseases
2	nsv902117	chr14:81643800-81682392	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81637000-81646400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr14:81637000-81647000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr14:81637000-81652200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr14:81637000-81659000	Weak transcription	Esophagus	oesophagus
5	chr14:81637000-81683800	Weak transcription	Small Intestine	intestine
6	chr14:81637200-81645000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr14:81637200-81645600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr14:81637200-81646200	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr14:81637200-81646800	Weak transcription	Fetal Intestine Small	intestine
10	chr14:81637200-81648400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr14:81637200-81650000	Weak transcription	Fetal Muscle Trunk	muscle
12	chr14:81637200-81650200	Weak transcription	Fetal Lung	lung
13	chr14:81637200-81651400	Weak transcription	H1 Cell Line	embryonic stem cell
14	chr14:81637200-81651800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr14:81637200-81652400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr14:81637200-81652600	Weak transcription	NHEK	skin
17	chr14:81637200-81652800	Weak transcription	Fetal Stomach	stomach
18	chr14:81637200-81653000	Weak transcription	Fetal Muscle Leg	muscle
19	chr14:81637200-81658200	Weak transcription	HSMMtube	muscle
20	chr14:81637200-81658800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr14:81637200-81658800	Weak transcription	Colonic Mucosa	Colon
22	chr14:81637200-81658800	Weak transcription	Left Ventricle	heart
23	chr14:81637400-81645600	Weak transcription	Cortex derived primary cultured neurospheres	brain
24	chr14:81637400-81646000	Weak transcription	K562	blood
25	chr14:81637400-81646200	Weak transcription	Primary T cells fromperipheralblood	blood
26	chr14:81637400-81646200	Weak transcription	Fetal Thymus	thymus
27	chr14:81637400-81646400	Weak transcription	Fetal Intestine Large	intestine
28	chr14:81637400-81646400	Weak transcription	Thymus	Thymus
29	chr14:81637400-81646600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
30	chr14:81637400-81646800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
31	chr14:81637400-81648200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
32	chr14:81637400-81649800	Weak transcription	HepG2	liver
33	chr14:81637400-81650000	Weak transcription	Adipose Nuclei	Adipose
34	chr14:81637400-81650000	Weak transcription	Fetal Kidney	kidney
35	chr14:81637400-81651600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr14:81637400-81651800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr14:81637400-81652200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr14:81637400-81653000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chr14:81637400-81653000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr14:81637400-81656800	Weak transcription	HMEC	breast
41	chr14:81637400-81658800	Weak transcription	Fetal Brain Male	brain
42	chr14:81637400-81659000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
43	chr14:81637600-81646600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
44	chr14:81637600-81646800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
45	chr14:81637600-81650000	Weak transcription	Hela-S3	cervix
46	chr14:81637600-81652400	Weak transcription	A549	lung
47	chr14:81638200-81648200	Weak transcription	HUVEC	blood vessel
48	chr14:81638400-81646600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr14:81638600-81670200	Weak transcription	Psoas Muscle	Psoas
50	chr14:81638800-81645400	Weak transcription	Placenta	Placenta

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