Variant report
| Variant | rs200857972 |
|---|---|
| Chromosome Location | chr9:43012522-43012523 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:1)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:1 , 50 per page) page:
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| No data |
| No data |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000269225 | TF binding region |
Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv1826083 | chr9:42228512-43187726 | Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer | TF binding regionCpG islandlncRNA | 41 gene(s) | inside rSNPs | diseases |
| 2 | esv1822891 | chr9:42316318-43198208 | Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandlncRNA | 37 gene(s) | inside rSNPs | diseases |
| 3 | nsv982243 | chr9:42995364-43160734 | Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Bivalent Enhancer | TF binding regionCpG islandlncRNA | 12 gene(s) | inside rSNPs | diseases |
| 4 | esv3427576 | chr9:42996356-43016654 | Inactive region | TF binding region | 2 gene(s) | inside rSNPs | diseases |
| 5 | esv3417498 | chr9:43001756-43016454 | Inactive region | TF binding region | 2 gene(s) | inside rSNPs | diseases |
| 6 | nsv973259 | chr9:43011927-43014034 | Inactive region | TF binding region | 1 gene(s) | inside rSNPs | diseases |
| 7 | esv3346561 | chr9:43012256-43015354 | Inactive region | TF binding region | 1 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
