Variant report

Variant	rs200878623
Chromosome Location	chr9:105162505-105162506
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048227	chr9:104546761-105162810	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv831675	chr9:105013834-105184661	Weak transcription Enhancers Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv428541	chr9:105044345-105201140	Weak transcription Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2263190	chr9:105162303-105162862	Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv5305	chr9:105162380-105162783	Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3523369	chr9:105162382-105162774	Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3523367	chr9:105162408-105162705	Enhancers	n/a	n/a	inside rSNPs	diseases
8	esv3523370	chr9:105162412-105162750	Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv3482611	chr9:105162413-105162740	Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv3482613	chr9:105162428-105162696	Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3523368	chr9:105162428-105162719	Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3349515	chr9:105162448-105162689	Enhancers	n/a	n/a	inside rSNPs	diseases
13	esv3482610	chr9:105162452-105162737	Enhancers	n/a	n/a	inside rSNPs	diseases
14	esv3482612	chr9:105162470-105162676	Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3523366	chr9:105162485-105162669	Enhancers	n/a	n/a	inside rSNPs	diseases
16	esv3482614	chr9:105162486-105162676	Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3523371	chr9:105162486-105162676	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:105161800-105163000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr9:105162200-105163000	Enhancers	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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