Variant report

Variant	rs200995718
Chromosome Location	chr1:175086277-175086278
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825487	chr1:175031609-175113572	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv3609	chr1:175046412-175094406	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv508648	chr1:175056387-175121913	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	esv3374467	chr1:175086165-175087783	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:175084600-175095600	Weak transcription	Right Atrium	heart
2	chr1:175084800-175086400	Weak transcription	Fetal Muscle Trunk	muscle
3	chr1:175084800-175087800	Weak transcription	Pancreas	Pancrea
4	chr1:175084800-175093800	Weak transcription	Adipose Nuclei	Adipose
5	chr1:175084800-175097000	Weak transcription	Gastric	stomach
6	chr1:175085000-175087600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr1:175085800-175086400	Enhancers	Fetal Intestine Large	intestine
8	chr1:175086000-175086400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr1:175086000-175086400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr1:175086200-175087200	Weak transcription	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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