Variant report

Variant	rs201088344
Chromosome Location	chr8:120898732-120898733
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534028	chr8:120348940-120906079	Flanking Active TSS Strong transcription Weak transcription Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
2	nsv949368	chr8:120568034-121019872	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv1021071	chr8:120589963-120968317	Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
4	nsv891418	chr8:120600965-121301474	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
5	nsv465789	chr8:120636850-120994394	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
6	nsv612111	chr8:120636850-120994394	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv427826	chr8:120642181-120953395	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv1027974	chr8:120885478-121079658	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
9	nsv539739	chr8:120885478-121079658	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
10	nsv972194	chr8:120898451-120965081	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:51 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120887200-120907600	Weak transcription	Pancreas	Pancrea
2	chr8:120887600-120899400	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr8:120888000-120903800	Weak transcription	Duodenum Mucosa	Duodenum
4	chr8:120888200-120903400	Weak transcription	Right Atrium	heart
5	chr8:120888200-120904600	Weak transcription	Fetal Kidney	kidney
6	chr8:120888600-120899400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
7	chr8:120888600-120899800	Weak transcription	Fetal Muscle Trunk	muscle
8	chr8:120889600-120902200	Weak transcription	Primary hematopoietic stem cells	blood
9	chr8:120889600-120905400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr8:120889800-120903200	Weak transcription	Stomach Smooth Muscle	stomach
11	chr8:120889800-120903600	Weak transcription	Fetal Stomach	stomach
12	chr8:120890000-120905400	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr8:120891200-120903800	Weak transcription	Fetal Intestine Large	intestine
14	chr8:120891800-120902200	Weak transcription	Fetal Intestine Small	intestine
15	chr8:120895600-120903600	Weak transcription	Fetal Lung	lung
16	chr8:120896200-120904800	Weak transcription	HSMMtube	muscle
17	chr8:120896400-120903600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr8:120897000-120899400	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr8:120897200-120898800	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr8:120897200-120901600	Enhancers	Colon Smooth Muscle	Colon
21	chr8:120897600-120899200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr8:120897600-120899400	Enhancers	Liver	Liver
23	chr8:120897600-120904400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr8:120897800-120901800	Enhancers	Brain Substantia Nigra	brain
25	chr8:120898000-120898800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr8:120898000-120901200	Enhancers	Brain Hippocampus Middle	brain
27	chr8:120898200-120899000	Enhancers	Breast Myoepithelial Primary Cells	Breast
28	chr8:120898200-120899200	Enhancers	Stomach Mucosa	stomach
29	chr8:120898400-120898800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
30	chr8:120898400-120898800	Enhancers	Brain Angular Gyrus	brain
31	chr8:120898400-120898800	Enhancers	Esophagus	oesophagus
32	chr8:120898400-120898800	Enhancers	Fetal Muscle Leg	muscle
33	chr8:120898400-120898800	Enhancers	Psoas Muscle	Psoas
34	chr8:120898400-120898800	Enhancers	Right Ventricle	heart
35	chr8:120898400-120898800	Enhancers	Small Intestine	intestine
36	chr8:120898400-120899000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
37	chr8:120898400-120899600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
38	chr8:120898400-120899600	Enhancers	Rectal Smooth Muscle	rectum
39	chr8:120898400-120901600	Enhancers	Ovary	ovary
40	chr8:120898400-120901800	Enhancers	Brain Cingulate Gyrus	brain
41	chr8:120898400-120901800	Enhancers	Brain Inferior Temporal Lobe	brain
42	chr8:120898400-120902200	Enhancers	Brain Anterior Caudate	brain
43	chr8:120898600-120898800	Enhancers	H1 Cell Line	embryonic stem cell
44	chr8:120898600-120898800	Enhancers	HUES6 Cell Line	embryonic stem cell
45	chr8:120898600-120898800	Genic enhancers	Gastric	stomach
46	chr8:120898600-120899000	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr8:120898600-120899000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
48	chr8:120898600-120899400	Enhancers	iPS-15b Cell Line	embryonic stem cell
49	chr8:120898600-120899600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr8:120898600-120900000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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