The 2.0 version of rSNPBase

Variant report

Variant rs201099101
Chromosome Location chr1:93975955-93975956
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93958000-93997200 Weak transcription HSMMtube muscle
2 chr1:93958800-93991800 Weak transcription Gastric stomach
3 chr1:93961000-93988400 Weak transcription HUVEC blood vessel
4 chr1:93962600-93984200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:93964600-93990200 Weak transcription HSMM muscle
6 chr1:93964600-94015200 Weak transcription Fetal Brain Male brain
7 chr1:93965000-94013200 Weak transcription Adipose Nuclei Adipose
8 chr1:93965000-94017400 Weak transcription Stomach Mucosa stomach
9 chr1:93965200-93984600 Weak transcription Duodenum Mucosa Duodenum
10 chr1:93965200-93984800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:93965400-93983600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr1:93967400-93984200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:93968600-93976800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:93968600-93984400 Weak transcription NHEK skin
15 chr1:93972200-93993800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:93972400-93977000 Weak transcription Lung lung
17 chr1:93973200-94016800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:93973400-94032000 Weak transcription Esophagus oesophagus
19 chr1:93974000-93985000 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:93975000-93976000 Weak transcription Fetal Muscle Leg muscle
21 chr1:93975000-93978000 Weak transcription K562 blood
22 chr1:93975000-93981800 Weak transcription Primary hematopoietic stem cells blood
23 chr1:93975000-93986800 Weak transcription Pancreas Pancrea
24 chr1:93975000-93988200 Weak transcription Fetal Kidney kidney
25 chr1:93975000-93996800 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr1:93975200-93984800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:93975200-93986200 Weak transcription HepG2 liver
28 chr1:93975200-93986800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:93975200-93988400 Weak transcription Dnd41 blood
30 chr1:93975200-93996800 Weak transcription H9 Cell Line embryonic stem cell
31 chr1:93975200-93997000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr1:93975400-93976200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:93975400-93978000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:93975400-93981800 Weak transcription Fetal Intestine Small intestine
35 chr1:93975400-93985200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:93975400-93986000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:93975400-93986200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:93975400-93986600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr1:93975400-93986600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:93975400-93986800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr1:93975400-93987800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:93975400-93991800 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:93975400-93995200 Weak transcription H1 Cell Line embryonic stem cell
44 chr1:93975400-93996000 Weak transcription Fetal Lung lung
45 chr1:93975400-93996800 Weak transcription Brain Germinal Matrix brain
46 chr1:93975400-93996800 Weak transcription Fetal Muscle Trunk muscle
47 chr1:93975400-93997000 Weak transcription Fetal Stomach stomach
48 chr1:93975400-93997200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr1:93975400-93997200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:93975400-93997400 Weak transcription Fetal Brain Female brain

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Last update: Aug 31, 2015