The 2.0 version of rSNPBase

Variant report

Variant rs201099239
Chromosome Location chr10:26734418-26734419
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:26728200-26745200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr10:26728200-26757000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr10:26729200-26735400 Weak transcription Duodenum Mucosa Duodenum
4 chr10:26730200-26738600 Weak transcription Liver Liver
5 chr10:26731000-26738000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr10:26731200-26734600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr10:26731200-26737200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr10:26731200-26749600 Weak transcription Spleen Spleen
9 chr10:26731400-26734600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr10:26731400-26734600 Enhancers Primary T cells fromperipheralblood blood
11 chr10:26731400-26734800 Weak transcription Adipose Nuclei Adipose
12 chr10:26731400-26735400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr10:26731400-26737200 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr10:26731400-26737400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr10:26731600-26734600 Weak transcription Primary hematopoietic stem cells blood
16 chr10:26731800-26735400 Genic enhancers Dnd41 blood
17 chr10:26732000-26737000 Genic enhancers Fetal Thymus thymus
18 chr10:26732600-26735800 Genic enhancers Thymus Thymus
19 chr10:26732600-26736000 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr10:26733000-26735400 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr10:26733000-26736400 Enhancers Primary T helper naive cells from peripheral blood blood
22 chr10:26733400-26734600 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr10:26733600-26734600 Weak transcription Primary T cells from cord blood blood
24 chr10:26733600-26734800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr10:26733600-26734800 Weak transcription Primary B cells from peripheral blood blood
26 chr10:26733600-26734800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr10:26733600-26735200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr10:26733600-26735400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr10:26733600-26736400 Enhancers Primary T regulatory cells fromperipheralblood blood
30 chr10:26734000-26734600 Enhancers Primary T helper cells PMA-I stimulated --
31 chr10:26734200-26734800 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr10:26734400-26734800 Enhancers Primary monocytes fromperipheralblood blood
33 chr10:26734400-26734800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr10:26734400-26735000 Flanking Active TSS GM12878-XiMat blood
35 chr10:26734400-26735800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
36 chr10:26734400-26735800 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
37 chr10:26734400-26736400 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr10:26734400-26737400 Enhancers Primary T helper cells fromperipheralblood blood
39 chr10:26734400-26738200 Genic enhancers Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015