Variant report

Variant	rs201273037
Chromosome Location	chr7:106811443-106811444
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:106682746..106686911-chr7:106807556..106811745,9	K562	blood:
2	chr7:106413235..106416729-chr7:106808294..106812162,5	K562	blood:
3	chr7:106811171..106813600-chr7:106828376..106831350,2	MCF-7	breast:
4	chr7:106806204..106812770-chr7:106813358..106822449,17	MCF-7	breast:
5	chr7:106808400..106812418-chr7:106824330..106827302,6	K562	blood:
6	chr7:106808413..106811737-chr7:107382761..107387306,8	K562	blood:
7	chr7:106806529..106812770-chr7:107382455..107386610,12	K562	blood:
8	chr7:106682031..106689663-chr7:106807150..106811711,11	K562	blood:
9	chr1:203691216..203693456-chr7:106809047..106812033,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000105856	Chromatin interaction
ENSG00000005249	Chromatin interaction
ENSG00000241764	Chromatin interaction
ENSG00000105879	Chromatin interaction
ENSG00000228742	Chromatin interaction
ENSG00000058668	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831087	chr7:106673465-106872460	Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
2	esv3383027	chr7:106802625-107096474	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	esv3355666	chr7:106810341-106812889	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:106807600-106812000	Active TSS	K562	blood
2	chr7:106807800-106811800	Active TSS	Ovary	ovary
3	chr7:106809000-106811800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:106809400-106812400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
5	chr7:106810600-106818200	Transcr. at gene 5' and 3'	Primary T helper cells PMA-I stimulated	--
6	chr7:106810600-106836800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr7:106810800-106811600	Weak transcription	Gastric	stomach
8	chr7:106810800-106811600	Weak transcription	Left Ventricle	heart
9	chr7:106810800-106811800	Weak transcription	Small Intestine	intestine
10	chr7:106810800-106814200	Weak transcription	Sigmoid Colon	Sigmoid Colon
11	chr7:106810800-106826800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr7:106810800-106828200	Weak transcription	Esophagus	oesophagus
13	chr7:106810800-106836200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr7:106811000-106811800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr7:106811000-106811800	Weak transcription	Placenta	Placenta
16	chr7:106811000-106811800	Enhancers	Fetal Thymus	thymus
17	chr7:106811000-106812000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr7:106811000-106812000	Enhancers	Fetal Heart	heart
19	chr7:106811000-106812000	Weak transcription	Fetal Muscle Trunk	muscle
20	chr7:106811000-106812000	Enhancers	Rectal Mucosa Donor 31	rectum
21	chr7:106811000-106812000	Enhancers	Rectal Smooth Muscle	rectum
22	chr7:106811000-106812200	Enhancers	Fetal Muscle Leg	muscle
23	chr7:106811000-106812200	Enhancers	Pancreas	Pancrea
24	chr7:106811000-106812400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
25	chr7:106811000-106814400	Weak transcription	Fetal Stomach	stomach
26	chr7:106811000-106815000	Weak transcription	Colonic Mucosa	Colon
27	chr7:106811000-106820000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr7:106811000-106820200	Weak transcription	HSMM	muscle
29	chr7:106811000-106824200	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr7:106811000-106826800	Weak transcription	H9 Cell Line	embryonic stem cell
31	chr7:106811000-106826800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
32	chr7:106811000-106828800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
33	chr7:106811200-106811600	Enhancers	HUVEC	blood vessel
34	chr7:106811200-106811800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr7:106811200-106811800	Enhancers	Primary B cells from peripheral blood	blood
36	chr7:106811200-106811800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
37	chr7:106811200-106811800	Enhancers	Brain Angular Gyrus	brain
38	chr7:106811200-106811800	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr7:106811200-106811800	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr7:106811200-106811800	Active TSS	Hela-S3	cervix
41	chr7:106811200-106812000	Enhancers	Primary monocytes fromperipheralblood	blood
42	chr7:106811200-106812000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr7:106811200-106812200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
44	chr7:106811200-106812400	Enhancers	Primary T cells fromperipheralblood	blood
45	chr7:106811200-106812400	Weak transcription	Colon Smooth Muscle	Colon
46	chr7:106811200-106812400	Enhancers	Spleen	Spleen
47	chr7:106811200-106812800	Weak transcription	A549	lung
48	chr7:106811200-106813600	Weak transcription	HUES6 Cell Line	embryonic stem cell
49	chr7:106811200-106813600	Enhancers	Brain Anterior Caudate	brain
50	chr7:106811200-106813600	Enhancers	Brain Inferior Temporal Lobe	brain

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