Variant report

Variant	rs201321505
Chromosome Location	chr4:166425063-166425064
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:166424717..166426500-chr4:166428424..166430670,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CPE-1	chr4:166424212-166425300	NONHSAT099106

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv508327	chr4:166424440-166475679	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166396400-166425400	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:166397600-166427600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr4:166397600-166428200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr4:166398000-166427000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr4:166409600-166428200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr4:166414200-166427000	Weak transcription	Fetal Heart	heart
7	chr4:166415000-166425400	Weak transcription	Fetal Muscle Leg	muscle
8	chr4:166420800-166428200	Weak transcription	Brain Substantia Nigra	brain
9	chr4:166420800-166433400	Weak transcription	Brain Germinal Matrix	brain
10	chr4:166421000-166428800	Weak transcription	Brain Anterior Caudate	brain
11	chr4:166421200-166428200	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr4:166421400-166433200	Weak transcription	Fetal Brain Male	brain
13	chr4:166421800-166428400	Weak transcription	Aorta	Aorta
14	chr4:166421800-166428800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr4:166422000-166425200	Weak transcription	Brain Angular Gyrus	brain
16	chr4:166422000-166426600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr4:166422000-166427200	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr4:166422000-166433200	Weak transcription	Fetal Brain Female	brain
19	chr4:166422400-166425600	Enhancers	HepG2	liver
20	chr4:166423200-166425600	Enhancers	Hela-S3	cervix
21	chr4:166423200-166428600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr4:166423400-166425200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr4:166423400-166425800	Enhancers	Adipose Nuclei	Adipose
24	chr4:166423800-166427200	Weak transcription	Right Atrium	heart
25	chr4:166424800-166425600	Enhancers	Colon Smooth Muscle	Colon
26	chr4:166424800-166425600	Enhancers	NHLF	lung
27	chr4:166424800-166425800	Enhancers	Fetal Stomach	stomach
28	chr4:166425000-166425200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
29	chr4:166425000-166427000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr4:166425000-166427000	Weak transcription	Pancreatic Islets	Pancreatic Islet
31	chr4:166425000-166427000	Weak transcription	Stomach Smooth Muscle	stomach
32	chr4:166425000-166427000	Weak transcription	NHDF-Ad	bronchial

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