Variant report

Variant rs201347407
Chromosome Location chr2:51255635-51255636
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:51246400-51258600 Weak transcription H9 Cell Line embryonic stem cell
2 chr2:51249400-51260400 Active TSS Brain Angular Gyrus brain
3 chr2:51251600-51255800 Weak transcription Primary B cells from cord blood blood
4 chr2:51252200-51255800 Enhancers Primary neutrophils fromperipheralblood blood
5 chr2:51252600-51258800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:51253600-51257400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr2:51253600-51257400 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr2:51253800-51257200 Weak transcription iPS-20b Cell Line embryonic stem cell
9 chr2:51253800-51257400 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr2:51253800-51257400 Weak transcription Right Atrium heart
11 chr2:51254000-51256000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr2:51254000-51257600 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr2:51254200-51256200 Transcr. at gene 5' and 3' Brain Germinal Matrix brain
14 chr2:51254200-51256200 Transcr. at gene 5' and 3' Fetal Brain Female brain
15 chr2:51254400-51255800 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:51254400-51255800 Weak transcription Brain Anterior Caudate brain
17 chr2:51254400-51256800 Enhancers Fetal Brain Male brain
18 chr2:51254600-51256200 Strong transcription H1 Cell Line embryonic stem cell
19 chr2:51254800-51255800 Weak transcription Brain Hippocampus Middle brain
20 chr2:51254800-51256000 Strong transcription Pancreatic Islets Pancreatic Islet
21 chr2:51254800-51256200 Strong transcription HUES48 Cell Line embryonic stem cell
22 chr2:51255200-51256000 Strong transcription Cortex derived primary cultured neurospheres brain
23 chr2:51255200-51256400 Enhancers Primary monocytes fromperipheralblood blood
24 chr2:51255200-51257400 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr2:51255200-51257800 Weak transcription Fetal Stomach stomach
26 chr2:51255400-51256200 Enhancers Monocytes-CD14+_RO01746 blood
27 chr2:51255400-51258800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr2:51255600-51255800 Flanking Active TSS Brain Cingulate Gyrus brain
29 chr2:51255600-51255800 Enhancers Brain Inferior Temporal Lobe brain
30 chr2:51255600-51256000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
31 chr2:51255600-51256200 Enhancers Fetal Muscle Leg muscle

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