Variant report

Variant	rs201444583
Chromosome Location	chr7:86836826-86836827
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:86835662..86838020-chr7:86838846..86841244,3	K562	blood:
2	chr7:86567664..86570566-chr7:86835025..86837514,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025277	chr7:86299224-87206007	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
2	nsv538999	chr7:86299224-87206007	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	nsv532147	chr7:86299225-87121975	Flanking Active TSS Strong transcription Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	85 gene(s)	inside rSNPs	diseases
4	nsv1016761	chr7:86758544-86914152	Enhancers Active TSS Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
5	nsv888676	chr7:86781423-86858824	Active TSS Strong transcription Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
6	nsv1026193	chr7:86790391-86856448	Weak transcription Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
7	nsv539003	chr7:86790391-86856448	Enhancers Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
8	nsv888677	chr7:86802025-87781111	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
9	nsv464622	chr7:86832603-87541248	Weak transcription Flanking Active TSS Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
10	nsv607725	chr7:86832603-87541248	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
11	nsv511977	chr7:86834623-86837232	Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv970415	chr7:86836246-86837124	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
13	esv9011	chr7:86836349-86837161	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	esv2141131	chr7:86836428-86837128	ZNF genes & repeats Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
15	esv3476335	chr7:86836519-86837023	Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
16	esv3492268	chr7:86836522-86837012	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
17	esv5173	chr7:86836523-86837028	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	esv3492265	chr7:86836525-86837034	Strong transcription Weak transcription Genic enhancers ZNF genes & repeats Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
19	esv3492266	chr7:86836550-86836960	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
20	esv3476337	chr7:86836551-86836993	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
21	esv3492270	chr7:86836557-86836974	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
22	esv3476333	chr7:86836558-86836989	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
23	esv3476334	chr7:86836570-86836947	ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
24	esv3492269	chr7:86836572-86836969	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
25	esv3357428	chr7:86836577-86836944	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
26	esv3419187	chr7:86836579-86836947	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
27	esv3476336	chr7:86836599-86836931	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
28	esv995303	chr7:86836615-86836923	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
29	nsv365994	chr7:86836615-86836923	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
30	esv3492267	chr7:86836615-86836925	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
31	esv3476338	chr7:86836615-86836939	ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
32	esv3492271	chr7:86836615-86836939	ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
33	nsv366774	chr7:86836630-86836938	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:93 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:86821000-86847400	Weak transcription	Stomach Mucosa	stomach
2	chr7:86822200-86841800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr7:86825000-86840000	Weak transcription	Ovary	ovary
4	chr7:86825600-86847400	Weak transcription	Placenta Amnion	Placenta Amnion
5	chr7:86825800-86843600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr7:86826800-86846000	Weak transcription	Fetal Kidney	kidney
7	chr7:86826800-86848200	Weak transcription	Left Ventricle	heart
8	chr7:86828400-86848200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr7:86829000-86837600	Weak transcription	Fetal Heart	heart
10	chr7:86829800-86848000	Weak transcription	Right Ventricle	heart
11	chr7:86830000-86839800	Weak transcription	HSMMtube	muscle
12	chr7:86831000-86847200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr7:86831600-86838400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr7:86831800-86838800	ZNF genes & repeats	GM12878-XiMat	blood
15	chr7:86832000-86838000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
16	chr7:86832000-86843400	Weak transcription	NHLF	lung
17	chr7:86832200-86840600	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr7:86832200-86843200	Weak transcription	Osteobl	bone
19	chr7:86832200-86846000	Weak transcription	HSMM	muscle
20	chr7:86832400-86841000	Weak transcription	Small Intestine	intestine
21	chr7:86832400-86845600	Weak transcription	Pancreas	Pancrea
22	chr7:86832400-86847200	Weak transcription	Rectal Mucosa Donor 31	rectum
23	chr7:86833400-86837200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
24	chr7:86833800-86841200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr7:86834000-86837200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
26	chr7:86834000-86837200	ZNF genes & repeats	Dnd41	blood
27	chr7:86834000-86838400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr7:86834000-86838400	ZNF genes & repeats	Fetal Intestine Small	intestine
29	chr7:86834600-86837200	ZNF genes & repeats	Primary B cells from cord blood	blood
30	chr7:86834600-86847200	Weak transcription	Colonic Mucosa	Colon
31	chr7:86834600-86847400	Weak transcription	Esophagus	oesophagus
32	chr7:86834600-86848200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr7:86834800-86837400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
34	chr7:86834800-86838000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr7:86835000-86837000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr7:86835000-86837400	ZNF genes & repeats	Fetal Lung	lung
37	chr7:86835200-86840800	Weak transcription	Stomach Smooth Muscle	stomach
38	chr7:86835200-86842400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr7:86835400-86841000	Weak transcription	Sigmoid Colon	Sigmoid Colon
40	chr7:86835600-86837400	ZNF genes & repeats	Fetal Muscle Leg	muscle
41	chr7:86835800-86837000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr7:86835800-86837600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr7:86835800-86837800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr7:86835800-86838000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr7:86835800-86846000	Weak transcription	Rectal Smooth Muscle	rectum
46	chr7:86836000-86837200	Enhancers	HMEC	breast
47	chr7:86836000-86837600	Weak transcription	Primary T cells fromperipheralblood	blood
48	chr7:86836000-86838400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr7:86836000-86842000	Weak transcription	Brain Anterior Caudate	brain
50	chr7:86836000-86842200	Weak transcription	Duodenum Smooth Muscle	Duodenum

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