The 2.0 version of rSNPBase

Variant report

Variant rs201662334
Chromosome Location chr2:11316383-11316384
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11329400 Weak transcription Gastric stomach
2 chr2:11296200-11412600 Weak transcription Aorta Aorta
3 chr2:11296400-11318800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr2:11296600-11319200 Weak transcription Fetal Lung lung
5 chr2:11296800-11318200 Weak transcription A549 lung
6 chr2:11296800-11379800 Weak transcription Small Intestine intestine
7 chr2:11297600-11394400 Weak transcription Right Ventricle heart
8 chr2:11298200-11317600 Weak transcription Fetal Brain Male brain
9 chr2:11299200-11357000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr2:11301400-11330400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr2:11301800-11324600 Weak transcription Primary B cells from cord blood blood
12 chr2:11302400-11321400 Weak transcription Fetal Intestine Small intestine
13 chr2:11302400-11326200 Weak transcription Fetal Muscle Trunk muscle
14 chr2:11302400-11335600 Weak transcription Lung lung
15 chr2:11304200-11317800 Weak transcription Fetal Muscle Leg muscle
16 chr2:11304400-11317800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr2:11304400-11321400 Weak transcription Esophagus oesophagus
18 chr2:11304400-11321400 Weak transcription Fetal Stomach stomach
19 chr2:11304400-11325200 Weak transcription Stomach Smooth Muscle stomach
20 chr2:11304400-11326400 Weak transcription Colon Smooth Muscle Colon
21 chr2:11304400-11329200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr2:11309800-11318200 Weak transcription Placenta Placenta
23 chr2:11309800-11327200 Weak transcription K562 blood
24 chr2:11309800-11335600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr2:11310000-11319200 Weak transcription Adipose Nuclei Adipose
26 chr2:11310000-11337200 Weak transcription Ovary ovary
27 chr2:11310600-11317800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr2:11310600-11433000 Weak transcription Pancreas Pancrea
29 chr2:11312800-11319400 Weak transcription Fetal Intestine Large intestine
30 chr2:11313800-11316600 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr2:11313800-11319000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr2:11314000-11318000 Weak transcription Fetal Kidney kidney
33 chr2:11314000-11318400 Enhancers Primary monocytes fromperipheralblood blood
34 chr2:11314000-11318400 Weak transcription HepG2 liver
35 chr2:11314600-11329600 Weak transcription Placenta Amnion Placenta Amnion
36 chr2:11314600-11332200 Weak transcription Colonic Mucosa Colon
37 chr2:11314600-11364200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr2:11314800-11316600 Enhancers Primary hematopoietic stem cells blood
39 chr2:11314800-11321400 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr2:11315000-11316400 Enhancers Primary neutrophils fromperipheralblood blood
41 chr2:11315000-11317400 Enhancers Dnd41 blood
42 chr2:11315200-11316400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:11315200-11316400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr2:11315200-11316400 Enhancers Primary T cells from cord blood blood
45 chr2:11315200-11316400 Enhancers Primary T helper cells PMA-I stimulated --
46 chr2:11315200-11316400 Enhancers HMEC breast
47 chr2:11315200-11316400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
48 chr2:11315200-11316400 Enhancers NHDF-Ad bronchial
49 chr2:11315400-11316400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr2:11315400-11316400 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015