Variant report

Variant	rs201680103
Chromosome Location	chr12:104293409-104293410
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr12:104293129..104295287-chr12:104295560..104297769,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34031	chr12:104114277-104298546	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
2	nsv560039	chr12:104177668-104455340	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
3	esv3520101	chr12:104291717-104294134	Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
4	esv2616568	chr12:104292875-104294553	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
5	esv9479	chr12:104293150-104293974	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	esv3520100	chr12:104293295-104293813	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3520098	chr12:104293307-104293831	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
8	esv3437450	chr12:104293322-104293822	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
9	esv3520102	chr12:104293327-104293757	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3520099	chr12:104293328-104293773	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3419987	chr12:104293334-104293794	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
12	esv3520103	chr12:104293337-104293773	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv5095	chr12:104293340-104293799	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
14	esv3492152	chr12:104293348-104293748	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
15	esv3331922	chr12:104293356-104293741	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
16	esv3383663	chr12:104293357-104293743	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
17	esv3417068	chr12:104293357-104293744	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
18	esv3492163	chr12:104293380-104293725	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
19	esv3492141	chr12:104293380-104293731	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv1010300	chr12:104293395-104293722	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
21	esv3520096	chr12:104293396-104293725	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
22	esv3492175	chr12:104293396-104293736	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
23	esv3520104	chr12:104293396-104293736	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
24	esv2633887	chr12:104293401-104293728	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:104284000-104299600	Weak transcription	GM12878-XiMat	blood
2	chr12:104284600-104294200	Weak transcription	Thymus	Thymus
3	chr12:104288400-104300000	Weak transcription	Brain Hippocampus Middle	brain
4	chr12:104292200-104294200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
5	chr12:104293200-104293600	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr12:104293200-104294800	Enhancers	Primary T cells from cord blood	blood

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