Variant report

Variant	rs201689480
Chromosome Location	chr9:72794732-72794733
allele	-/CT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047862	chr9:72746875-73138287	Enhancers Strong transcription Genic enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	esv3339092	chr9:72793832-72795430	Weak transcription Strong transcription	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:72759600-72800000	Weak transcription	Right Ventricle	heart
2	chr9:72775200-72800000	Weak transcription	Esophagus	oesophagus
3	chr9:72777800-72800000	Weak transcription	Fetal Stomach	stomach
4	chr9:72780400-72796000	Weak transcription	Fetal Muscle Leg	muscle
5	chr9:72780400-72800000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr9:72780600-72801400	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr9:72780600-72803600	Weak transcription	Skeletal Muscle Female	skeletal muscle
8	chr9:72783800-72801600	Weak transcription	Rectal Mucosa Donor 29	rectum
9	chr9:72784600-72802000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
10	chr9:72786400-72795400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr9:72786400-72800400	Weak transcription	Aorta	Aorta
12	chr9:72788200-72800200	Weak transcription	Left Ventricle	heart
13	chr9:72792800-72801600	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr9:72793000-72842600	Weak transcription	Rectal Smooth Muscle	rectum
15	chr9:72793200-72795200	Weak transcription	NH-A	brain
16	chr9:72793200-72804800	Weak transcription	Colon Smooth Muscle	Colon
17	chr9:72793400-72795000	Weak transcription	Adipose Nuclei	Adipose
18	chr9:72793400-72802200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr9:72793600-72795800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr9:72793600-72799800	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr9:72793800-72800200	Weak transcription	Ovary	ovary
22	chr9:72793800-72801000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr9:72794000-72795800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr9:72794000-72799800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr9:72794000-72799800	Weak transcription	HSMMtube	muscle
26	chr9:72794000-72800000	Weak transcription	Stomach Smooth Muscle	stomach
27	chr9:72794000-72801600	Weak transcription	HSMM	muscle
28	chr9:72794000-72806800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr9:72794200-72795600	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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