The 2.0 version of rSNPBase

Variant report

Variant rs201706416
Chromosome Location chr6:44529236-44529237
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:44523000-44531000 Weak transcription Ovary ovary
2 chr6:44524000-44531000 Weak transcription Gastric stomach
3 chr6:44526600-44531000 Weak transcription Right Atrium heart
4 chr6:44527600-44535400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:44528000-44529600 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr6:44528000-44532600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr6:44528400-44529400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
8 chr6:44528600-44529400 Enhancers HUES64 Cell Line embryonic stem cell
9 chr6:44528600-44529400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr6:44528600-44529400 Bivalent Enhancer Fetal Muscle Trunk muscle
11 chr6:44528600-44529800 Enhancers Primary hematopoietic stem cells blood
12 chr6:44528600-44529800 Enhancers Fetal Lung lung
13 chr6:44528600-44530200 Enhancers Fetal Thymus thymus
14 chr6:44528800-44529400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr6:44528800-44529400 Active TSS Primary T cells from cord blood blood
16 chr6:44528800-44529400 Bivalent Enhancer Primary T cells fromperipheralblood blood
17 chr6:44528800-44529400 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
18 chr6:44528800-44529400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr6:44528800-44529400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:44528800-44529600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr6:44528800-44529800 Bivalent Enhancer Adipose Nuclei Adipose
22 chr6:44528800-44530000 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr6:44529000-44529400 Bivalent/Poised TSS Brain Hippocampus Middle brain
24 chr6:44529000-44529400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
25 chr6:44529000-44529400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
26 chr6:44529000-44529400 Enhancers Placenta Amnion Placenta Amnion
27 chr6:44529000-44529400 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
28 chr6:44529000-44529400 Bivalent/Poised TSS Osteobl bone
29 chr6:44529000-44529600 Enhancers Primary B cells from cord blood blood
30 chr6:44529000-44529800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr6:44529000-44529800 Enhancers Lung lung
32 chr6:44529000-44530000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr6:44529000-44530000 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr6:44529000-44530200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:44529000-44531000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr6:44529200-44529400 Flanking Bivalent TSS/Enh Fetal Stomach stomach
37 chr6:44529200-44529400 Enhancers Psoas Muscle Psoas
38 chr6:44529200-44529400 Flanking Bivalent TSS/Enh Dnd41 blood
39 chr6:44529200-44529600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:44529200-44529800 Enhancers Primary Natural Killer cells fromperipheralblood blood
41 chr6:44529200-44529800 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
42 chr6:44529200-44530200 Enhancers Thymus Thymus
43 chr6:44529200-44530600 Enhancers Primary monocytes fromperipheralblood blood
44 chr6:44529200-44531200 Weak transcription Pancreas Pancrea
45 chr6:44529200-44531400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015