The 2.0 version of rSNPBase

Variant report

Variant rs201770334
Chromosome Location chr1:94197203-94197204
allele -/TAAAATAAAATAAAA
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94188000-94198400 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr1:94188800-94198400 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:94189000-94200000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:94189400-94197400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr1:94189600-94198200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr1:94190000-94199000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:94190200-94198200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:94190400-94199000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:94190600-94200800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:94193000-94198000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:94193400-94198000 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr1:94193800-94198200 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:94194000-94198000 Weak transcription Primary B cells from peripheral blood blood
14 chr1:94194400-94197400 Weak transcription Right Atrium heart
15 chr1:94194800-94197400 Weak transcription Adipose Nuclei Adipose
16 chr1:94195200-94197800 Enhancers Placenta Placenta
17 chr1:94195400-94199200 Weak transcription Brain Angular Gyrus brain
18 chr1:94195600-94198000 Enhancers NHEK skin
19 chr1:94195800-94197400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:94195800-94198000 Enhancers HMEC breast
21 chr1:94195800-94199000 Enhancers Fetal Thymus thymus
22 chr1:94196000-94197400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:94196000-94197400 Weak transcription Fetal Muscle Trunk muscle
24 chr1:94196200-94200600 Weak transcription Placenta Amnion Placenta Amnion
25 chr1:94196200-94205800 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:94196400-94197600 Enhancers Spleen Spleen
27 chr1:94196400-94197800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:94196400-94198600 Enhancers Ovary ovary
29 chr1:94196600-94197400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:94196600-94197400 Weak transcription Fetal Muscle Leg muscle
31 chr1:94196600-94197600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:94196600-94197600 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr1:94196600-94197600 Weak transcription GM12878-XiMat blood
34 chr1:94196600-94198000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:94196600-94200000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:94196600-94204000 Weak transcription Lung lung
37 chr1:94196800-94197400 Weak transcription Hela-S3 cervix
38 chr1:94197000-94197400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:94197000-94197400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:94197200-94197600 Weak transcription HepG2 liver
41 chr1:94197200-94199800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015