Variant report

Variant	rs201789401
Chromosome Location	chr2:36955973-36955974
allele	-/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007757	chr2:36838387-37011384	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv535643	chr2:36838387-37011384	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1004483	chr2:36875235-37356812	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv535644	chr2:36875235-37356812	Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
5	esv3324872	chr2:36954923-36956971	Weak transcription Enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3491604	chr2:36955453-36956129	Weak transcription	n/a	n/a	inside rSNPs	diseases
7	esv3491602	chr2:36955560-36956078	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3491603	chr2:36955567-36956091	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3457535	chr2:36955578-36956050	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3457534	chr2:36955578-36956081	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv9230	chr2:36955578-36956106	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3457533	chr2:36955591-36956090	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv3491601	chr2:36955609-36956034	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3491599	chr2:36955612-36956027	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3351665	chr2:36955625-36955999	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3457532	chr2:36955647-36955981	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3491600	chr2:36955659-36955976	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3457536	chr2:36955661-36955991	Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3491605	chr2:36955661-36955991	Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv1427533	chr2:36955674-36955990	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:36941000-36960200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr2:36942600-36968800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr2:36948400-36958800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr2:36951600-36957200	Weak transcription	Ovary	ovary
5	chr2:36951800-36958800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr2:36952000-36956800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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