The 2.0 version of rSNPBase

Variant report

Variant rs201900
Chromosome Location chr11:32629190-32629191
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:32609000-32629600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr11:32609400-32630200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr11:32616800-32631000 Weak transcription HSMMtube muscle
4 chr11:32617000-32632000 Weak transcription Gastric stomach
5 chr11:32618400-32630000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr11:32621000-32631600 Weak transcription Brain Hippocampus Middle brain
7 chr11:32621000-32631600 Weak transcription Psoas Muscle Psoas
8 chr11:32622600-32629800 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr11:32622800-32629200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr11:32622800-32629200 Weak transcription Stomach Smooth Muscle stomach
11 chr11:32624600-32629600 Strong transcription Brain Germinal Matrix brain
12 chr11:32625000-32630000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr11:32625400-32637200 Weak transcription Fetal Heart heart
14 chr11:32625800-32634800 Weak transcription HepG2 liver
15 chr11:32626000-32629200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr11:32626000-32629400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
17 chr11:32626000-32629400 Weak transcription Primary hematopoietic stem cells blood
18 chr11:32626000-32629400 Weak transcription Placenta Placenta
19 chr11:32626000-32629400 Weak transcription Ovary ovary
20 chr11:32626000-32629400 Weak transcription NHDF-Ad bronchial
21 chr11:32626000-32629600 Weak transcription H9 Cell Line embryonic stem cell
22 chr11:32626000-32629600 Weak transcription Lung lung
23 chr11:32626000-32629800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr11:32626000-32629800 Weak transcription Fetal Stomach stomach
25 chr11:32626000-32629800 Weak transcription Left Ventricle heart
26 chr11:32626000-32630000 Weak transcription Thymus Thymus
27 chr11:32626000-32631600 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr11:32626200-32629200 Weak transcription Primary B cells from peripheral blood blood
29 chr11:32626200-32629800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:32626200-32630000 Weak transcription Fetal Brain Female brain
31 chr11:32626200-32630800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr11:32626200-32631800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr11:32626600-32629400 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr11:32626600-32632400 Weak transcription Fetal Kidney kidney
35 chr11:32626800-32629400 Weak transcription Fetal Intestine Small intestine
36 chr11:32627200-32631600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr11:32627200-32635000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr11:32627400-32629200 Weak transcription Adipose Nuclei Adipose
39 chr11:32627400-32629400 Weak transcription Primary T cells fromperipheralblood blood
40 chr11:32627400-32629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr11:32627400-32629800 Weak transcription Fetal Muscle Leg muscle
42 chr11:32627400-32630800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr11:32627400-32630800 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr11:32627400-32631000 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr11:32627400-32631200 Weak transcription Primary T cells from cord blood blood
46 chr11:32627600-32630800 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr11:32627800-32629200 Weak transcription H1 Cell Line embryonic stem cell
48 chr11:32627800-32629200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr11:32627800-32631600 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr11:32628000-32629200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015