Variant report

Variant	rs202012861
Chromosome Location	chr17:66961259-66961260
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1067334	chr17:66695039-67221585	Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
2	nsv543411	chr17:66695039-67221585	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
3	nsv1061151	chr17:66881617-66973917	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
4	nsv908700	chr17:66885526-66985992	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
5	nsv908701	chr17:66888346-66978319	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
6	esv1846502	chr17:66899261-66966274	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
7	esv1849165	chr17:66899261-66978319	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	nsv908703	chr17:66904001-66978319	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
9	esv3362627	chr17:66960307-66962305	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
10	esv2551004	chr17:66960355-66961879	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv9159	chr17:66960712-66961472	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv1970031	chr17:66960733-66961446	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
13	esv3314873	chr17:66960823-66961354	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3524905	chr17:66960826-66961375	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3524908	chr17:66960830-66961359	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv3524904	chr17:66960843-66961296	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv3314877	chr17:66960865-66961333	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	esv5238	chr17:66960866-66961338	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3314876	chr17:66960867-66961329	Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv3524903	chr17:66960873-66961313	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	esv3314872	chr17:66960875-66961286	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	esv3524906	chr17:66960881-66961307	Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv3426997	chr17:66960889-66961280	Weak transcription	n/a	n/a	inside rSNPs	n/a
24	esv3440971	chr17:66960892-66961445	Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv3314874	chr17:66960911-66961267	Weak transcription	n/a	n/a	inside rSNPs	n/a
26	esv995953	chr17:66960927-66961259	Weak transcription	n/a	n/a	inside rSNPs	n/a
27	esv3524909	chr17:66960927-66961261	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv3314878	chr17:66960927-66961275	Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv3524910	chr17:66960927-66961275	Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv1608576	chr17:66960941-66961274	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:66958600-66965000	Weak transcription	Fetal Brain Male	brain
2	chr17:66960800-66969200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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