Variant report

Variant	rs202178198
Chromosome Location	chr6:31939073-31939074
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:103)
CpG islands
(count:122)
Chromatin interactive
region (count:27)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:103 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:31938474-31940650	GM19193	blood:	n/a	n/a
2	POLR2A	chr6:31938752-31941149	Hela-S3	cervix:	n/a	n/a
3	POLR2A	chr6:31938882-31941175	GM12878	blood:	n/a	n/a
4	POLR2A	chr6:31938662-31941771	IMR90	lung:	n/a	n/a
5	POLR2A	chr6:31938929-31941244	K562	blood:	n/a	n/a
6	POLR2A	chr6:31937284-31941234	K562	blood:	n/a	n/a
7	POLR2A	chr6:31938559-31940522	HUVEC	blood vessel:	n/a	n/a
8	POLR2A	chr6:31937431-31941001	GM12892	blood:	n/a	n/a
9	POLR2A	chr6:31937473-31940648	PANC-1	pancreas:	n/a	n/a
10	NFATC1	chr6:31938506-31940406	GM12878	blood:	n/a	n/a
11	POLR2A	chr6:31937360-31941122	HepG2	liver:	n/a	n/a
12	POLR2A	chr6:31935907-31941545	HepG2	liver:	n/a	n/a
13	POLR2A	chr6:31936260-31941395	K562	blood:	n/a	n/a
14	POLR2A	chr6:31938465-31940549	HCT-116	colon:	n/a	n/a
15	POLR2A	chr6:31937353-31941181	K562	blood:	n/a	n/a
16	POLR2A	chr6:31938389-31940570	HCT-116	colon:	n/a	n/a
17	POLR2A	chr6:31938002-31941081	MCF10A-Er-Src	breast:	n/a	n/a
18	POLR2A	chr6:31938533-31939107	GM12878	blood:	n/a	n/a
19	POLR2A	chr6:31935432-31941169	K562	blood:	n/a	n/a
20	POLR2A	chr6:31937171-31940595	HepG2	liver:	n/a	n/a
21	POLR2A	chr6:31938789-31940287	HCT-116	colon:	n/a	n/a
22	MAX	chr6:31939027-31941248	K562	blood:	n/a	chr6:31940293-31940302
23	HCFC1	chr6:31938727-31941371	Hela-S3	cervix:	n/a	n/a
24	TCF12	chr6:31938924-31940436	A549	lung:	n/a	n/a
25	POLR2A	chr6:31939047-31940719	MCF-7	breast:	n/a	n/a
26	POLR2A	chr6:31938844-31940553	U87	brain:	n/a	n/a
27	POLR2A	chr6:31938585-31940721	MCF-7	breast:	n/a	n/a
28	POLR2A	chr6:31937740-31940568	HL-60	blood:	n/a	n/a
29	POLR2A	chr6:31936682-31940672	PFSK-1	brain:	n/a	n/a
30	MAZ	chr6:31938781-31941398	IMR90	lung:	n/a	chr6:31940293-31940302
31	POLR2A	chr6:31939035-31940577	H1-hESC	embryonic stem cell:	n/a	n/a
32	POLR2A	chr6:31936493-31941269	GM12892	blood:	n/a	n/a
33	POLR2A	chr6:31938529-31940676	HUVEC	blood vessel:	n/a	n/a
34	POLR2A	chr6:31937608-31940714	HL-60	blood:	n/a	n/a
35	STAT5A	chr6:31938690-31941033	GM12878	blood:	n/a	n/a
36	POLR2A	chr6:31937600-31941256	PBDE	blood:	n/a	n/a
37	POLR2A	chr6:31937408-31940545	PANC-1	pancreas:	n/a	n/a
38	POLR2A	chr6:31937811-31941100	GM12892	blood:	n/a	n/a
39	CREB1	chr6:31938564-31941087	HepG2	liver:	n/a	n/a
40	PBX3	chr6:31938524-31940281	A549	lung:	n/a	n/a
41	POLR2A	chr6:31938832-31940617	GM12892	blood:	n/a	n/a
42	POLR2A	chr6:31938720-31940531	SK-N-MC	brain:	n/a	n/a
43	PBX3	chr6:31937847-31940400	SK-N-SH	brain:	n/a	n/a
44	POLR2A	chr6:31937686-31940604	SK-N-SH	brain:	n/a	n/a
45	POLR2A	chr6:31938568-31940703	ECC-1	luminal epithelium:	n/a	n/a
46	ELF1	chr6:31938997-31940823	GM12878	blood:	n/a	n/a
47	CREB1	chr6:31939065-31941175	K562	blood:	n/a	n/a
48	CHD2	chr6:31938843-31940611	Hela-S3	cervix:	n/a	n/a
49	POLR2A	chr6:31938317-31940432	SK-N-SH	brain:	n/a	n/a
50	THAP1	chr6:31939043-31939349	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31939025-31939075	HCM	heart:	n/a
2	chr6:31939059-31939109	HRE	kidney:	n/a
3	chr6:31939059-31939109	HCT-116	colon:	n/a
4	chr6:31939059-31939109	SK-N-SH	brain:	n/a
5	chr6:31939025-31939075	K562	blood:	n/a
6	chr6:31939025-31939075	CMK	blood:	n/a
7	chr6:31939025-31939075	H1-hESC	embryonic stem cell:	embryo
8	chr6:31939025-31939075	PrEC	prostate:	n/a
9	chr6:31939059-31939109	HCPEpiC	choroid plexus:	n/a
10	chr6:31939025-31939075	GM06990	blood:	n/a
11	chr6:31939025-31939075	HCT-116	colon:	n/a
12	chr6:31939059-31939109	AoSMC	blood vessel:	n/a
13	chr6:31939059-31939109	ProgFib	skin:	n/a
14	chr6:31939059-31939109	PANC-1	pancreas:	n/a
15	chr6:31939059-31939109	AG09319	gingival:	n/a
16	chr6:31939059-31939109	HPAEpiC	pulmonary alveolar:	n/a
17	chr6:31939025-31939075	SKMC	muscle:	n/a
18	chr6:31939059-31939109	GM12892	blood:	n/a
19	chr6:31939059-31939109	HIPEpiC	eye:	n/a
20	chr6:31939059-31939109	AG10803	skin:	n/a
21	chr6:31939059-31939109	NT2-D1	testis:	n/a
22	chr6:31939059-31939109	SK-N-SH_RA	brain:	n/a
23	chr6:31939025-31939075	ECC-1	luminal epithelium:	n/a
24	chr6:31939025-31939075	RPTEC	kidney:	n/a
25	chr6:31939059-31939109	Hepatocyte	liver:	n/a
26	chr6:31939059-31939109	CMK	blood:	n/a
27	chr6:31939025-31939075	PANC-1	pancreas:	n/a
28	chr6:31939025-31939075	HEK293	kidney:	embryo
29	chr6:31939059-31939109	NHDF-neo	bronchial:	n/a
30	chr6:31939025-31939075	AG10803	skin:	n/a
31	chr6:31939025-31939075	SK-N-SH	brain:	n/a
32	chr6:31939025-31939075	Jurkat	blood:	n/a
33	chr6:31939059-31939109	SKMC	muscle:	n/a
34	chr6:31939059-31939109	PFSK-1	brain:	n/a
35	chr6:31939059-31939109	T-47D	breast:	n/a
36	chr6:31939025-31939075	PFSK-1	brain:	n/a
37	chr6:31939059-31939109	GM19239	blood:	n/a
38	chr6:31939059-31939109	HUVEC	blood vessel:	n/a
39	chr6:31939059-31939109	Caco-2	colon:	n/a
40	chr6:31939059-31939109	GM12878	blood:	n/a
41	chr6:31939025-31939075	NB4	blood:	n/a
42	chr6:31939059-31939109	Hela-S3	cervix:	n/a
43	chr6:31939059-31939109	HNPCEpiC	eye:	n/a
44	chr6:31939025-31939075	ovcar-3	ovarian:	n/a
45	chr6:31939059-31939109	SK-N-MC	brain:	n/a
46	chr6:31939059-31939109	NH-A	brain:	n/a
47	chr6:31939059-31939109	U87	brain:	n/a
48	chr6:31939059-31939109	A549	lung:	n/a
49	chr6:31939025-31939075	HRCEpiC	kidney:	n/a
50	chr6:31939025-31939075	HepG2	liver:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31802844..31805158-chr6:31938598..31941453,3	K562	blood:
2	chr6:31763649..31765429-chr6:31938517..31942129,4	K562	blood:
3	chr6:31938655..31941642-chr6:32120425..32122384,2	K562	blood:
4	chr6:31867614..31871926-chr6:31937988..31942087,9	K562	blood:
5	chr6:31864068..31872693-chr6:31934470..31941847,12	MCF-7	breast:
6	chr6:31781426..31784987-chr6:31937458..31940746,3	K562	blood:
7	chr6:31705460..31708202-chr6:31937853..31939865,2	K562	blood:
8	chr6:31887719..31889549-chr6:31938108..31940067,2	MCF-7	breast:
9	chr6:31938465..31944613-chr6:32012205..32018958,7	K562	blood:
10	chr6:31937794..31943427-chr6:31944150..31949640,18	K562	blood:
11	chr6:31866210..31871385-chr6:31935988..31941288,8	K562	blood:
12	chr6:31938465..31941001-chr6:32013795..32015947,2	K562	blood:
13	chr6:31863628..31867852-chr6:31937946..31941812,10	MCF-7	breast:
14	chr6:31900289..31902605-chr6:31938581..31941421,2	K562	blood:
15	chr6:31938785..31941869-chr6:32936192..32938386,3	MCF-7	breast:
16	chr6:31631495..31634660-chr6:31935613..31943206,9	K562	blood:
17	chr6:31868706..31872478-chr6:31938286..31942065,5	MCF-7	breast:
18	chr6:31863236..31865768-chr6:31937517..31940391,2	K562	blood:
19	chr6:31937366..31939733-chr6:32937181..32939543,3	K562	blood:
20	chr6:31632223..31634660-chr6:31938839..31941215,3	K562	blood:
21	chr6:31587332..31589434-chr6:31937953..31940828,2	K562	blood:
22	chr6:31794009..31796794-chr6:31937769..31941181,3	K562	blood:
23	chr6:31830673..31832900-chr6:31938643..31940364,3	MCF-7	breast:
24	chr6:31938987..31942159-chr6:31944563..31949146,6	MCF-7	breast:
25	chr6:31705740..31708202-chr6:31937563..31940759,3	K562	blood:
26	chr6:31701251..31705281-chr6:31936091..31940341,4	K562	blood:
27	chr6:31802366..31805115-chr6:31938170..31940148,2	K562	blood:

No data

Variant related genes	Relation type
STK19	TF binding region
DXO	TF binding region
STK19	CpG island
DXO	CpG island
ENSG00000204256	Chromatin interaction
ENSG00000213719	Chromatin interaction
ENSG00000204388	Chromatin interaction
ENSG00000204435	Chromatin interaction
ENSG00000204389	Chromatin interaction
ENSG00000204387	Chromatin interaction
ENSG00000263020	Chromatin interaction
ENSG00000204385	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000201754	Chromatin interaction
ENSG00000223837	Chromatin interaction
ENSG00000221988	Chromatin interaction
ENSG00000204410	Chromatin interaction
ENSG00000204344	Chromatin interaction
ENSG00000201823	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204390	Chromatin interaction
ENSG00000255152	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000204314	Chromatin interaction
ENSG00000168477	Chromatin interaction
ENSG00000204366	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000204438	Chromatin interaction
ENSG00000204257	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000258388	Chromatin interaction

Extended variants
information (count: 35 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
2	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
3	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
5	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
7	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
9	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
10	nsv601950	chr6:31785438-32492308	Enhancers Bivalent Enhancer Active TSS Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
11	nsv601951	chr6:31785438-32496748	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
12	nsv601955	chr6:31785453-32484368	Genic enhancers Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	196 gene(s)	inside rSNPs	diseases
13	nsv601956	chr6:31785453-32492308	Strong transcription Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	197 gene(s)	inside rSNPs	diseases
14	nsv601961	chr6:31868322-32484368	Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	126 gene(s)	inside rSNPs	diseases
15	nsv427751	chr6:31871512-32092843	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
16	nsv428141	chr6:31871512-32092843	Enhancers Strong transcription Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	91 gene(s)	inside rSNPs	diseases
17	esv2758043	chr6:31871512-32209113	Genic enhancers Enhancers Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
18	esv2759415	chr6:31871512-32209113	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	114 gene(s)	inside rSNPs	diseases
19	nsv830628	chr6:31887554-31947600	Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	69 gene(s)	inside rSNPs	diseases
20	nsv933250	chr6:31905060-32008005	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
21	nsv934279	chr6:31905060-32013902	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
22	nsv884513	chr6:31922575-32066025	Bivalent Enhancer Strong transcription Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
23	nsv884514	chr6:31923052-31958960	Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
24	nsv932869	chr6:31924496-32013902	Weak transcription Genic enhancers Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
25	nsv933913	chr6:31924682-32009282	Active TSS Strong transcription Weak transcription Genic enhancers Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
26	nsv284	chr6:31925739-31996721	Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
27	nsv5247	chr6:31925739-32023216	Transcr. at gene 5' and 3' Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
28	nsv884515	chr6:31930805-31946614	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	51 gene(s)	inside rSNPs	diseases
29	nsv884516	chr6:31931673-31946614	Active TSS Strong transcription Genic enhancers Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	51 gene(s)	inside rSNPs	diseases
30	nsv884517	chr6:31931673-32057627	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
31	nsv538190	chr6:31932347-32037290	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
32	nsv884518	chr6:31933518-31946614	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	50 gene(s)	inside rSNPs	diseases
33	nsv884519	chr6:31937116-31947594	Enhancers Genic enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
34	nsv884520	chr6:31938291-31946614	Weak transcription Flanking Active TSS Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases
35	nsv601970	chr6:31938451-31948029	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	49 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31927600-31939400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr6:31934400-31939200	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr6:31936800-31939200	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:31937200-31939200	Genic enhancers	Spleen	Spleen
5	chr6:31937400-31939200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr6:31937800-31939200	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:31937800-31939400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr6:31938000-31939200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
9	chr6:31938000-31939200	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr6:31938000-31939200	Weak transcription	Aorta	Aorta
11	chr6:31938000-31939200	Transcr. at gene 5' and 3'	Fetal Adrenal Gland	Adrenal Gland
12	chr6:31938000-31939200	Flanking Active TSS	Hela-S3	cervix
13	chr6:31938200-31939200	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr6:31938200-31939200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:31938200-31939200	Enhancers	Fetal Brain Male	brain
16	chr6:31938200-31939200	Weak transcription	Ovary	ovary
17	chr6:31938200-31939600	Flanking Active TSS	NH-A	brain
18	chr6:31938200-31940800	Active TSS	Fetal Kidney	kidney
19	chr6:31938200-31940800	Active TSS	Pancreatic Islets	Pancreatic Islet
20	chr6:31938400-31939400	Flanking Active TSS	Brain Hippocampus Middle	brain
21	chr6:31938400-31939600	Flanking Active TSS	GM12878-XiMat	blood
22	chr6:31938400-31939600	Flanking Active TSS	HMEC	breast
23	chr6:31938400-31939600	Flanking Active TSS	Osteobl	bone
24	chr6:31938400-31939800	Flanking Active TSS	Liver	Liver
25	chr6:31938400-31939800	Flanking Active TSS	Brain Germinal Matrix	brain
26	chr6:31938400-31939800	Flanking Active TSS	Duodenum Mucosa	Duodenum
27	chr6:31938400-31939800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
28	chr6:31938600-31939200	Enhancers	Primary B cells from cord blood	blood
29	chr6:31938600-31939400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
30	chr6:31938600-31939400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
31	chr6:31938600-31939400	Flanking Active TSS	Colon Smooth Muscle	Colon
32	chr6:31938600-31939400	Enhancers	Fetal Heart	heart
33	chr6:31938600-31939400	Flanking Active TSS	Pancreas	Pancrea
34	chr6:31938600-31939400	Flanking Active TSS	HUVEC	blood vessel
35	chr6:31938600-31939600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr6:31938600-31939600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
37	chr6:31938600-31939600	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr6:31938600-31939600	Flanking Active TSS	Fetal Brain Female	brain
39	chr6:31938600-31939800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
40	chr6:31938600-31939800	Flanking Active TSS	Stomach Smooth Muscle	stomach
41	chr6:31938600-31939800	Flanking Active TSS	Dnd41	blood
42	chr6:31938600-31939800	Flanking Active TSS	K562	blood
43	chr6:31938800-31939200	Transcr. at gene 5' and 3'	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr6:31938800-31939200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
45	chr6:31938800-31939200	Enhancers	Primary monocytes fromperipheralblood	blood
46	chr6:31938800-31939200	Enhancers	Primary neutrophils fromperipheralblood	blood
47	chr6:31938800-31939200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr6:31938800-31939200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
49	chr6:31938800-31939200	Transcr. at gene 5' and 3'	Fetal Muscle Trunk	muscle
50	chr6:31938800-31939200	Flanking Active TSS	Gastric	stomach

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