Variant report

Variant rs2021835
Chromosome Location chr6:27778097-27778098
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:27774200-27779200 Active TSS HUES6 Cell Line embryonic stem cell
2 chr6:27774200-27779200 Active TSS iPS-15b Cell Line embryonic stem cell
3 chr6:27774200-27779400 Active TSS HUES48 Cell Line embryonic stem cell
4 chr6:27774200-27779800 Active TSS iPS-18 Cell Line embryonic stem cell
5 chr6:27774200-27779800 Active TSS Thymus Thymus
6 chr6:27774200-27779800 Active TSS A549 lung
7 chr6:27774400-27778400 Active TSS Brain Germinal Matrix brain
8 chr6:27774400-27778400 Active TSS Fetal Intestine Large intestine
9 chr6:27774400-27778800 Active TSS Fetal Brain Female brain
10 chr6:27774400-27779000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
11 chr6:27774400-27779200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:27774400-27779200 Active TSS NHDF-Ad bronchial
13 chr6:27774400-27780000 Active TSS H9 Cell Line embryonic stem cell
14 chr6:27774400-27780000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr6:27774400-27780000 Active TSS iPS-20b Cell Line embryonic stem cell
16 chr6:27774400-27780000 Active TSS ES-UCSF4 Cell Line embryonic stem cell
17 chr6:27774400-27780200 Active TSS H1 Cell Line embryonic stem cell
18 chr6:27774400-27784000 Active TSS ES-I3 Cell Line embryonic stem cell
19 chr6:27774600-27779600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:27774800-27778400 Active TSS Breast Myoepithelial Primary Cells Breast
21 chr6:27774800-27778800 Active TSS Fetal Intestine Small intestine
22 chr6:27775000-27778400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr6:27775200-27778600 Active TSS Hela-S3 cervix
24 chr6:27775200-27779000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr6:27775200-27779600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr6:27775400-27778200 Active TSS Fetal Muscle Leg muscle
27 chr6:27775400-27778200 Active TSS HepG2 liver
28 chr6:27775400-27778400 Active TSS Muscle Satellite Cultured Cells --
29 chr6:27775400-27778600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:27775400-27778600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
31 chr6:27775400-27779000 Active TSS NHEK skin
32 chr6:27775400-27779800 Active TSS Fetal Thymus thymus
33 chr6:27776200-27780000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr6:27776400-27779600 Flanking Active TSS Primary B cells from cord blood blood
35 chr6:27776800-27778200 Active TSS Rectal Mucosa Donor 29 rectum
36 chr6:27776800-27778400 Active TSS Fetal Kidney kidney
37 chr6:27776800-27778400 Active TSS Fetal Stomach stomach
38 chr6:27776800-27778800 Active TSS GM12878-XiMat blood
39 chr6:27776800-27779000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
40 chr6:27776800-27779200 Active TSS NHLF lung
41 chr6:27777000-27778200 Active TSS Rectal Mucosa Donor 31 rectum
42 chr6:27777200-27778200 Active TSS Fetal Brain Male brain
43 chr6:27777400-27778200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr6:27777400-27778200 Active TSS Primary monocytes fromperipheralblood blood
45 chr6:27777400-27778200 Active TSS Primary hematopoietic stem cells short term culture blood
46 chr6:27777400-27778200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
47 chr6:27777400-27778200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr6:27777400-27778200 Active TSS Cortex derived primary cultured neurospheres brain
49 chr6:27777400-27778200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr6:27777400-27778200 Active TSS NH-A brain

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