Variant report

Variant	rs202227165
Chromosome Location	chr4:28564603-28564604
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1010133	chr4:28273244-28642942	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1014938	chr4:28277683-28642942	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	esv2757926	chr4:28543958-28839437	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases
4	esv2759239	chr4:28543958-28839437	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases
5	esv3384238	chr4:28563604-28565602	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
6	esv8125	chr4:28564125-28564872	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
7	esv3464971	chr4:28564163-28564719	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv3364687	chr4:28564197-28564701	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv3499000	chr4:28564214-28564653	Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3464973	chr4:28564219-28564685	Weak transcription	n/a	n/a	inside rSNPs	n/a
11	esv3464976	chr4:28564223-28564684	Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv3464972	chr4:28564231-28564640	Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv3498999	chr4:28564243-28564659	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3464974	chr4:28564273-28564615	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3499001	chr4:28564283-28564627	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv1006399	chr4:28564286-28564609	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv3464977	chr4:28564287-28564625	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	esv3499002	chr4:28564287-28564625	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv1541206	chr4:28564300-28564624	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:28559600-28566600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr4:28564200-28564800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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