Variant report

Variant	rs2040342
Chromosome Location	chr4:26489270-26489271
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs10033605	0.81[EUR][1000 genomes]
rs2000978	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6448456	0.82[CEU][hapmap];0.81[EUR][1000 genomes]
rs6850415	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26480200-26491000	Weak transcription	Right Atrium	heart
2	chr4:26483000-26490600	Weak transcription	Gastric	stomach
3	chr4:26485800-26490800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr4:26485800-26491000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr4:26487400-26490800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr4:26488400-26490400	Weak transcription	Colon Smooth Muscle	Colon

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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