Variant report
| Variant | rs2045171 |
|---|---|
| Chromosome Location | chr12:33039375-33039376 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:32997800-33044400 | Weak transcription | Hela-S3 | cervix |
| 2 | chr12:32997800-33046000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 3 | chr12:33014800-33041200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 4 | chr12:33031200-33040800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 5 | chr12:33031200-33041000 | Weak transcription | HMEC | breast |
| 6 | chr12:33031200-33041600 | Weak transcription | Ovary | ovary |
| 7 | chr12:33031400-33042000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 8 | chr12:33031600-33041000 | Weak transcription | Left Ventricle | heart |
| 9 | chr12:33031600-33041800 | Weak transcription | NHEK | skin |
| 10 | chr12:33031600-33044600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 11 | chr12:33032000-33043200 | Enhancers | Fetal Heart | heart |
| 12 | chr12:33032200-33042000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr12:33032800-33044400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 14 | chr12:33032800-33045000 | Weak transcription | Colonic Mucosa | Colon |
| 15 | chr12:33033600-33042000 | Weak transcription | Pancreas | Pancrea |
| 16 | chr12:33033600-33044600 | Weak transcription | Right Atrium | heart |
| 17 | chr12:33034000-33044600 | Weak transcription | Duodenum Mucosa | Duodenum |
| 18 | chr12:33034200-33044200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 19 | chr12:33035000-33040400 | Weak transcription | Fetal Intestine Small | intestine |
| 20 | chr12:33035000-33047400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 21 | chr12:33035600-33044000 | Weak transcription | Fetal Intestine Large | intestine |
| 22 | chr12:33036600-33039600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 23 | chr12:33036600-33039800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 24 | chr12:33036600-33045000 | Weak transcription | Liver | Liver |
| 25 | chr12:33036800-33040000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 26 | chr12:33037000-33041800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr12:33037200-33041800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 28 | chr12:33037400-33041000 | Weak transcription | Placenta | Placenta |
| 29 | chr12:33037600-33039600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 30 | chr12:33037800-33039400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 31 | chr12:33038200-33041800 | Weak transcription | HepG2 | liver |
| 32 | chr12:33038400-33039800 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 33 | chr12:33038400-33041800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 34 | chr12:33038600-33040000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 35 | chr12:33038800-33039600 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 36 | chr12:33039000-33039400 | Flanking Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 37 | chr12:33039000-33039400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 38 | chr12:33039000-33039400 | Enhancers | Stomach Mucosa | stomach |
| 39 | chr12:33039000-33047600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 40 | chr12:33039200-33042000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 41 | chr12:33039200-33044600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 42 | chr12:33039200-33044600 | Weak transcription | H9 Cell Line | embryonic stem cell |
