Variant report
| Variant | rs2047641 |
|---|---|
| Chromosome Location | chr12:32616798-32616799 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:32594600-32659000 | Weak transcription | Esophagus | oesophagus |
| 2 | chr12:32601800-32629400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 3 | chr12:32602600-32636400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 4 | chr12:32606000-32623600 | Weak transcription | Pancreas | Pancrea |
| 5 | chr12:32606000-32624600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 6 | chr12:32606000-32624600 | Weak transcription | Gastric | stomach |
| 7 | chr12:32606600-32624600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 8 | chr12:32608600-32629600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 9 | chr12:32609000-32617000 | Weak transcription | Ovary | ovary |
| 10 | chr12:32609200-32619600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 11 | chr12:32609400-32618600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr12:32609400-32623400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr12:32609600-32619200 | Weak transcription | Fetal Stomach | stomach |
| 14 | chr12:32610000-32623200 | Weak transcription | Fetal Intestine Large | intestine |
| 15 | chr12:32610400-32618200 | Weak transcription | Fetal Intestine Small | intestine |
| 16 | chr12:32610400-32618600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 17 | chr12:32610400-32628400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 18 | chr12:32610600-32619200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 19 | chr12:32610600-32621400 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr12:32610800-32623800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 21 | chr12:32610800-32624400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 22 | chr12:32610800-32636400 | Weak transcription | NHEK | skin |
| 23 | chr12:32610800-32639000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr12:32611200-32621000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 25 | chr12:32611200-32629000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 26 | chr12:32611400-32621000 | Weak transcription | HUVEC | blood vessel |
| 27 | chr12:32614600-32621000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 28 | chr12:32614800-32618600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 29 | chr12:32615000-32616800 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 30 | chr12:32615000-32616800 | Enhancers | HSMMtube | muscle |
| 31 | chr12:32615400-32617000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 32 | chr12:32615400-32619400 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 33 | chr12:32615600-32616800 | Genic enhancers | HUES64 Cell Line | embryonic stem cell |
| 34 | chr12:32615600-32619200 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 35 | chr12:32615800-32617000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 36 | chr12:32615800-32617400 | Enhancers | HSMM | muscle |
| 37 | chr12:32616000-32621000 | Weak transcription | Right Ventricle | heart |
| 38 | chr12:32616000-32638600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 39 | chr12:32616400-32616800 | Enhancers | A549 | lung |
| 40 | chr12:32616400-32617200 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 41 | chr12:32616400-32618600 | Weak transcription | HMEC | breast |
| 42 | chr12:32616400-32618800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 43 | chr12:32616400-32619000 | Weak transcription | HepG2 | liver |
| 44 | chr12:32616400-32621000 | Weak transcription | Fetal Heart | heart |
| 45 | chr12:32616600-32616800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 46 | chr12:32616600-32616800 | Enhancers | Psoas Muscle | Psoas |
| 47 | chr12:32616600-32617200 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 48 | chr12:32616600-32617400 | Enhancers | Left Ventricle | heart |
| 49 | chr12:32616600-32618200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 50 | chr12:32616600-32628200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
