Variant report

Variant rs204890
Chromosome Location chr6:32085598-32085599
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32077000-32087000 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr6:32077000-32087000 Weak transcription A549 lung
3 chr6:32077400-32087200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr6:32078200-32094600 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr6:32078600-32091600 Weak transcription Psoas Muscle Psoas
6 chr6:32080800-32093800 Strong transcription Brain Germinal Matrix brain
7 chr6:32081000-32086800 Strong transcription Primary hematopoietic stem cells short term culture blood
8 chr6:32081000-32094000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr6:32081000-32094400 Strong transcription Primary T cells from cord blood blood
10 chr6:32081200-32086800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:32081200-32090800 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr6:32081200-32094200 Strong transcription Fetal Brain Female brain
13 chr6:32081200-32094400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr6:32081200-32094400 Strong transcription Thymus Thymus
15 chr6:32081400-32086800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:32081400-32086800 Strong transcription Fetal Thymus thymus
17 chr6:32081400-32092200 Strong transcription GM12878-XiMat blood
18 chr6:32081600-32094200 Strong transcription Sigmoid Colon Sigmoid Colon
19 chr6:32081800-32086400 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr6:32081800-32086800 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr6:32081800-32086800 Weak transcription Fetal Brain Male brain
22 chr6:32081800-32086800 Weak transcription Fetal Heart heart
23 chr6:32082000-32086400 Weak transcription Fetal Kidney kidney
24 chr6:32082000-32087000 Strong transcription Gastric stomach
25 chr6:32082000-32087200 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr6:32082200-32093600 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr6:32082400-32085800 Genic enhancers Fetal Muscle Trunk muscle
28 chr6:32082400-32086800 Strong transcription H1 Cell Line embryonic stem cell
29 chr6:32082400-32086800 Strong transcription Cortex derived primary cultured neurospheres brain
30 chr6:32082400-32094200 Strong transcription Primary T helper naive cells fromperipheralblood blood
31 chr6:32082600-32086400 Strong transcription Brain Inferior Temporal Lobe brain
32 chr6:32082600-32086400 Strong transcription Brain Substantia Nigra brain
33 chr6:32082600-32086400 Strong transcription Colonic Mucosa Colon
34 chr6:32082600-32086400 Strong transcription Duodenum Mucosa Duodenum
35 chr6:32082600-32086400 Strong transcription Rectal Mucosa Donor 29 rectum
36 chr6:32082600-32086400 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr6:32082600-32086400 Strong transcription Stomach Smooth Muscle stomach
38 chr6:32082600-32086600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr6:32082600-32086800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr6:32082600-32086800 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr6:32082600-32086800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr6:32082600-32086800 Strong transcription Brain Hippocampus Middle brain
43 chr6:32082600-32087000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr6:32082600-32090200 Strong transcription H9 Cell Line embryonic stem cell
45 chr6:32082600-32090600 Strong transcription Primary monocytes fromperipheralblood blood
46 chr6:32082600-32091200 Strong transcription Esophagus oesophagus
47 chr6:32082600-32093600 Strong transcription Dnd41 blood
48 chr6:32082600-32094000 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr6:32082600-32094400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr6:32082600-32094600 Strong transcription Primary Natural Killer cells fromperipheralblood blood

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