The 2.0 version of rSNPBase

Variant report

Variant rs2051452
Chromosome Location chr1:159022152-159022153
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158980200-159025400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:158982600-159027400 Weak transcription Fetal Kidney kidney
3 chr1:158984200-159024200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:158984800-159027400 Weak transcription Psoas Muscle Psoas
5 chr1:158985400-159023800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:158988600-159024000 Strong transcription Primary hematopoietic stem cells short term culture blood
7 chr1:158993000-159023200 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr1:158998400-159024000 Strong transcription Primary monocytes fromperipheralblood blood
9 chr1:158998800-159033800 Weak transcription Fetal Brain Female brain
10 chr1:158999000-159022800 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr1:158999200-159023800 Strong transcription Duodenum Smooth Muscle Duodenum
12 chr1:159000000-159026200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr1:159000400-159024200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr1:159000600-159023800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:159001000-159027400 Weak transcription Right Ventricle heart
16 chr1:159001400-159024200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:159001400-159036200 Weak transcription Small Intestine intestine
18 chr1:159001600-159028400 Strong transcription Fetal Thymus thymus
19 chr1:159004600-159022800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:159005400-159023200 Weak transcription Brain Cingulate Gyrus brain
21 chr1:159005600-159027200 Weak transcription Brain Angular Gyrus brain
22 chr1:159006800-159024200 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:159007200-159026800 Weak transcription Pancreas Pancrea
24 chr1:159009000-159023000 Weak transcription Fetal Muscle Trunk muscle
25 chr1:159009000-159026400 Strong transcription Dnd41 blood
26 chr1:159009200-159030400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:159010600-159023800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:159010600-159026400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr1:159011400-159022800 Strong transcription Primary B cells from peripheral blood blood
30 chr1:159011400-159023800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr1:159011400-159024000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:159011600-159023800 Strong transcription Osteobl bone
33 chr1:159013000-159025600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:159015200-159023800 Strong transcription HSMM muscle
35 chr1:159016400-159024800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:159016600-159023400 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr1:159016600-159023800 Weak transcription Stomach Mucosa stomach
38 chr1:159016800-159023600 Strong transcription Primary T helper cells fromperipheralblood blood
39 chr1:159017000-159023000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
40 chr1:159017000-159025600 Weak transcription Colon Smooth Muscle Colon
41 chr1:159017000-159026800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:159017600-159023200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr1:159017800-159023800 Strong transcription HMEC breast
44 chr1:159018000-159024400 Strong transcription Primary hematopoietic stem cells blood
45 chr1:159018000-159026000 Strong transcription Hela-S3 cervix
46 chr1:159018200-159024000 Strong transcription Muscle Satellite Cultured Cells --
47 chr1:159018200-159026200 Strong transcription Ovary ovary
48 chr1:159019200-159024000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:159019400-159022800 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr1:159019400-159023000 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015