The 2.0 version of rSNPBase

Variant report

Variant rs2052962
Chromosome Location chr7:128855457-128855458
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:128830600-128861800 Weak transcription Thymus Thymus
2 chr7:128841400-128855600 Weak transcription HSMM muscle
3 chr7:128842400-128864000 Weak transcription Rectal Smooth Muscle rectum
4 chr7:128843200-128864000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr7:128843400-128864200 Weak transcription Spleen Spleen
6 chr7:128843600-128858200 Weak transcription Dnd41 blood
7 chr7:128844600-128863800 Weak transcription Fetal Brain Male brain
8 chr7:128844800-128864000 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr7:128845800-128863600 Weak transcription Colonic Mucosa Colon
10 chr7:128846600-128858400 Weak transcription Left Ventricle heart
11 chr7:128846600-128862200 Weak transcription Duodenum Mucosa Duodenum
12 chr7:128847200-128864000 Weak transcription Psoas Muscle Psoas
13 chr7:128847600-128858400 Weak transcription Adipose Nuclei Adipose
14 chr7:128847600-128864000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr7:128849600-128858600 Weak transcription Primary hematopoietic stem cells blood
16 chr7:128849800-128864000 Weak transcription Fetal Kidney kidney
17 chr7:128850800-128858200 Weak transcription Brain Anterior Caudate brain
18 chr7:128851000-128857200 Weak transcription Right Ventricle heart
19 chr7:128851000-128858200 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr7:128851600-128858400 Weak transcription Colon Smooth Muscle Colon
21 chr7:128851600-128864200 Weak transcription Esophagus oesophagus
22 chr7:128851800-128858400 Weak transcription Brain Substantia Nigra brain
23 chr7:128852000-128856200 Weak transcription Fetal Brain Female brain
24 chr7:128852200-128857000 Weak transcription A549 lung
25 chr7:128852600-128864000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr7:128852800-128858200 Weak transcription Lung lung
27 chr7:128852800-128858400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr7:128852800-128858400 Weak transcription Stomach Smooth Muscle stomach
29 chr7:128852800-128861600 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr7:128852800-128861800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr7:128853000-128863800 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr7:128853200-128857000 Weak transcription Liver Liver
33 chr7:128853200-128858600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr7:128853200-128863600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr7:128853200-128863800 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr7:128853200-128864000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr7:128853200-128864000 Weak transcription Fetal Lung lung
38 chr7:128853400-128855600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr7:128853400-128864400 Weak transcription Ovary ovary
40 chr7:128854200-128858200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr7:128854200-128858400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr7:128854200-128858400 Weak transcription Brain Cingulate Gyrus brain
43 chr7:128854200-128858400 Weak transcription Brain Hippocampus Middle brain
44 chr7:128854200-128858400 Weak transcription Fetal Stomach stomach
45 chr7:128854200-128864000 Weak transcription Right Atrium heart
46 chr7:128854400-128857000 Weak transcription HepG2 liver
47 chr7:128854600-128856600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
48 chr7:128855000-128855800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr7:128855000-128855800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
50 chr7:128855000-128856600 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015