Variant report
| Variant | rs20555 |
|---|---|
| Chromosome Location | chr7:107601751-107601752 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:107579400-107636200 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr7:107582800-107605800 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 3 | chr7:107585000-107611800 | Weak transcription | K562 | blood |
| 4 | chr7:107588400-107607000 | Weak transcription | Brain Angular Gyrus | brain |
| 5 | chr7:107590200-107607200 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr7:107590200-107612400 | Strong transcription | Fetal Intestine Small | intestine |
| 7 | chr7:107591000-107605600 | Strong transcription | Duodenum Mucosa | Duodenum |
| 8 | chr7:107591000-107607600 | Strong transcription | Fetal Intestine Large | intestine |
| 9 | chr7:107591200-107612000 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 10 | chr7:107592000-107615200 | Weak transcription | Spleen | Spleen |
| 11 | chr7:107592400-107607200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 12 | chr7:107592600-107602000 | Weak transcription | Lung | lung |
| 13 | chr7:107593400-107635600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 14 | chr7:107593600-107605600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 15 | chr7:107593800-107611200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 16 | chr7:107594400-107608600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 17 | chr7:107594600-107606400 | Strong transcription | HepG2 | liver |
| 18 | chr7:107594600-107607400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 19 | chr7:107594800-107602200 | Strong transcription | Fetal Stomach | stomach |
| 20 | chr7:107594800-107606600 | Strong transcription | A549 | lung |
| 21 | chr7:107594800-107607000 | Strong transcription | HUVEC | blood vessel |
| 22 | chr7:107595600-107612200 | Strong transcription | Fetal Kidney | kidney |
| 23 | chr7:107596800-107603400 | Strong transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr7:107597000-107619200 | Weak transcription | Small Intestine | intestine |
| 25 | chr7:107598000-107602600 | Genic enhancers | NHLF | lung |
| 26 | chr7:107598200-107602600 | Genic enhancers | Colon Smooth Muscle | Colon |
| 27 | chr7:107598200-107606000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 28 | chr7:107598600-107605600 | Strong transcription | Placenta Amnion | Placenta Amnion |
| 29 | chr7:107598800-107602800 | Genic enhancers | HSMM | muscle |
| 30 | chr7:107599000-107602800 | Strong transcription | Fetal Brain Female | brain |
| 31 | chr7:107599200-107602800 | Genic enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 32 | chr7:107599200-107606400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 33 | chr7:107599400-107602400 | Genic enhancers | Adipose Nuclei | Adipose |
| 34 | chr7:107599400-107602600 | Strong transcription | Gastric | stomach |
| 35 | chr7:107599400-107602600 | Strong transcription | Pancreas | Pancrea |
| 36 | chr7:107599400-107603600 | Genic enhancers | Fetal Muscle Leg | muscle |
| 37 | chr7:107599400-107609200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 38 | chr7:107599600-107602800 | Genic enhancers | Left Ventricle | heart |
| 39 | chr7:107599600-107603600 | Genic enhancers | Fetal Muscle Trunk | muscle |
| 40 | chr7:107599600-107605000 | Strong transcription | Colonic Mucosa | Colon |
| 41 | chr7:107599800-107602000 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 42 | chr7:107599800-107602000 | Strong transcription | Fetal Lung | lung |
| 43 | chr7:107599800-107602800 | Enhancers | Ovary | ovary |
| 44 | chr7:107599800-107602800 | Genic enhancers | HSMMtube | muscle |
| 45 | chr7:107600000-107605800 | Strong transcription | NHDF-Ad | bronchial |
| 46 | chr7:107600000-107606200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 47 | chr7:107600000-107606600 | Strong transcription | NHEK | skin |
| 48 | chr7:107600000-107606800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 49 | chr7:107600000-107607000 | Strong transcription | HMEC | breast |
| 50 | chr7:107600000-107610600 | Weak transcription | Esophagus | oesophagus |
