The 2.0 version of rSNPBase

Variant report

Variant rs2065942
Chromosome Location chr1:165614797-165614798
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165601600-165615200 Weak transcription Spleen Spleen
2 chr1:165601800-165615200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
3 chr1:165602000-165622800 Weak transcription Primary hematopoietic stem cells blood
4 chr1:165602200-165624200 Weak transcription Dnd41 blood
5 chr1:165602400-165614800 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:165602400-165615000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:165602600-165615000 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr1:165603000-165614800 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:165603000-165619800 Weak transcription HSMMtube muscle
10 chr1:165603600-165614800 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr1:165603600-165614800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:165603600-165617400 Weak transcription Rectal Smooth Muscle rectum
13 chr1:165603800-165624200 Weak transcription Brain Germinal Matrix brain
14 chr1:165603800-165631200 Weak transcription Fetal Kidney kidney
15 chr1:165604000-165616000 Weak transcription Gastric stomach
16 chr1:165604400-165614800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:165604400-165628000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr1:165604600-165620000 Weak transcription Fetal Brain Female brain
19 chr1:165604800-165623000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr1:165604800-165628400 Weak transcription H1 Cell Line embryonic stem cell
21 chr1:165604800-165632200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:165605000-165620200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr1:165605200-165620000 Weak transcription Primary T cells from cord blood blood
24 chr1:165605200-165628800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr1:165605400-165620200 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr1:165605600-165618000 Weak transcription ES-I3 Cell Line embryonic stem cell
27 chr1:165605600-165622600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:165606200-165617000 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr1:165606200-165659600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:165606400-165619600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:165606800-165616600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:165606800-165622800 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr1:165607200-165614800 Weak transcription Hela-S3 cervix
34 chr1:165607200-165615400 Weak transcription Fetal Muscle Leg muscle
35 chr1:165607200-165618000 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr1:165607200-165619200 Weak transcription NH-A brain
37 chr1:165607200-165620000 Weak transcription Fetal Brain Male brain
38 chr1:165607200-165623000 Weak transcription H9 Cell Line embryonic stem cell
39 chr1:165607400-165617200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:165607400-165620000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:165607400-165620200 Weak transcription NHLF lung
42 chr1:165607600-165615800 Weak transcription Colonic Mucosa Colon
43 chr1:165608000-165617000 Weak transcription Fetal Stomach stomach
44 chr1:165608600-165614800 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr1:165608600-165618200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:165608800-165615200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr1:165609000-165614800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr1:165609000-165615600 Enhancers Fetal Adrenal Gland Adrenal Gland
49 chr1:165609400-165619000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr1:165609600-165619000 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015