Variant report

Variant	rs2067757
Chromosome Location	chr8:61176633-61176634
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:61175226..61177364-chr8:61192482..61194475,2	MCF-7	breast:
2	chr8:61171205..61174050-chr8:61175161..61177205,2	K562	blood:

Variant related genes	Relation type
ENSG00000178538	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs6982241	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917756	chr8:60942299-61862796	Enhancers Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
2	nsv1022752	chr8:61095248-61322302	Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	nsv831333	chr8:61102862-61275122	Strong transcription Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
4	esv3371465	chr8:61115030-61356658	Bivalent Enhancer Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
5	nsv890943	chr8:61134995-61225652	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
6	nsv831334	chr8:61148796-61330190	Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:61158800-61176800	Weak transcription	A549	lung
2	chr8:61164200-61186600	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr8:61167000-61177400	Weak transcription	Fetal Thymus	thymus
4	chr8:61167000-61180200	Weak transcription	Left Ventricle	heart
5	chr8:61167000-61193200	Weak transcription	Gastric	stomach
6	chr8:61167000-61193200	Weak transcription	Lung	lung
7	chr8:61167000-61193200	Weak transcription	Pancreas	Pancrea
8	chr8:61167600-61186400	Weak transcription	Primary hematopoietic stem cells	blood
9	chr8:61168200-61176800	Weak transcription	Fetal Stomach	stomach
10	chr8:61170400-61178800	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr8:61172600-61180600	Weak transcription	Placenta	Placenta
12	chr8:61172600-61185800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
13	chr8:61172800-61191200	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr8:61173000-61187600	Weak transcription	Brain Cingulate Gyrus	brain
15	chr8:61174600-61178400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:61174600-61178800	Strong transcription	Fetal Intestine Large	intestine
17	chr8:61174600-61186600	Strong transcription	K562	blood
18	chr8:61175000-61178200	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr8:61175000-61178200	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr8:61175600-61177200	Strong transcription	Fetal Intestine Small	intestine

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