Variant report

Variant	rs2068282
Chromosome Location	chr7:14309600-14309601
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12113518	1.00[AMR][1000 genomes]
rs73679706	1.00[AMR][1000 genomes]
rs7798177	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949033	chr7:14086106-14860323	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:14303800-14310000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr7:14306000-14309800	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr7:14306000-14310400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr7:14306000-14310600	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr7:14307000-14311000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr7:14308600-14312000	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr7:14308600-14312600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr7:14309000-14313800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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