Variant report
| Variant | rs2069415 |
|---|---|
| Chromosome Location | chr12:56365979-56365980 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56361200-56366800 | Weak transcription | Aorta | Aorta |
| 2 | chr12:56361200-56367200 | Transcr. at gene 5' and 3' | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 3 | chr12:56361400-56366000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 4 | chr12:56361400-56366000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 5 | chr12:56361400-56366600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 6 | chr12:56361400-56366600 | Weak transcription | Brain Anterior Caudate | brain |
| 7 | chr12:56361400-56366600 | Weak transcription | Left Ventricle | heart |
| 8 | chr12:56361400-56366600 | Weak transcription | Psoas Muscle | Psoas |
| 9 | chr12:56361400-56366800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 10 | chr12:56361600-56366000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 11 | chr12:56361600-56366000 | Weak transcription | Colonic Mucosa | Colon |
| 12 | chr12:56361600-56366000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 13 | chr12:56361600-56366200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 14 | chr12:56361600-56366200 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 15 | chr12:56361600-56366200 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 16 | chr12:56361600-56366400 | Weak transcription | Primary B cells from cord blood | blood |
| 17 | chr12:56361600-56366400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 18 | chr12:56361600-56366600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 19 | chr12:56361800-56366000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 20 | chr12:56361800-56366000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 21 | chr12:56361800-56366000 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 22 | chr12:56361800-56366000 | Weak transcription | Brain Germinal Matrix | brain |
| 23 | chr12:56361800-56366000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 24 | chr12:56361800-56366000 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 25 | chr12:56361800-56366000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 26 | chr12:56361800-56366400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 27 | chr12:56361800-56366600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 28 | chr12:56361800-56366600 | Weak transcription | Brain Substantia Nigra | brain |
| 29 | chr12:56361800-56366600 | Weak transcription | Esophagus | oesophagus |
| 30 | chr12:56361800-56366600 | Weak transcription | Pancreas | Pancrea |
| 31 | chr12:56361800-56366600 | Weak transcription | Spleen | Spleen |
| 32 | chr12:56362000-56366000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 33 | chr12:56362000-56366200 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 34 | chr12:56362000-56366200 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 35 | chr12:56362000-56366200 | Strong transcription | Fetal Muscle Trunk | muscle |
| 36 | chr12:56362000-56366400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 37 | chr12:56362000-56366400 | Weak transcription | Right Ventricle | heart |
| 38 | chr12:56362000-56366600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 39 | chr12:56362000-56366800 | Weak transcription | Gastric | stomach |
| 40 | chr12:56362200-56366000 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 41 | chr12:56362200-56366200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 42 | chr12:56362200-56366400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 43 | chr12:56362200-56366400 | Genic enhancers | Dnd41 | blood |
| 44 | chr12:56362200-56366600 | Weak transcription | Fetal Kidney | kidney |
| 45 | chr12:56362200-56366800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 46 | chr12:56362400-56366000 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 47 | chr12:56362400-56366200 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 48 | chr12:56362400-56366200 | Weak transcription | Primary T cells from cord blood | blood |
| 49 | chr12:56362400-56366600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 50 | chr12:56362800-56366000 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
