Variant report

Variant	rs2070821
Chromosome Location	chrX:153627297-153627298
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	USF1	chrX:153627235-153627367	GM12878	blood:	n/a	n/a
2	ELF1	chrX:153626228-153627383	K562	blood:	n/a	n/a
3	MYC	chrX:153627121-153627350	MCF-7	breast:	n/a	chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627199-153627208 chrX:153627313-153627323 chrX:153627314-153627321 chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627313-153627323
4	CTCF	chrX:153627180-153627330	AG04449	skin:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
5	STAT3	chrX:153627189-153627541	GM12878	blood:	n/a	n/a
6	YY1	chrX:153625329-153627326	A549	lung:	n/a	chrX:153626458-153626470
7	CREB1	chrX:153627049-153627365	A549	lung:	n/a	n/a
8	CHD1	chrX:153626608-153628530	H1-hESC	embryonic stem cell:	n/a	n/a
9	POLR2A	chrX:153625570-153630890	GM12892	blood:	n/a	n/a
10	CTCF	chrX:153627220-153627370	WERI-Rb-1	eye:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
11	MYC	chrX:153627082-153627412	MCF-7	breast:	n/a	chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627199-153627208 chrX:153627313-153627323 chrX:153627314-153627321 chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627313-153627323
12	CTCF	chrX:153627160-153627310	AoAF	blood vessel:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
13	STAT3	chrX:153626566-153627393	MCF10A-Er-Src	breast:	n/a	n/a
14	MAFF	chrX:153626674-153627691	K562	blood:	n/a	n/a
15	CTCF	chrX:153627200-153627350	GM12872	blood:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
16	CTCF	chrX:153627200-153627350	HMEC	breast:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
17	POLR2A	chrX:153627030-153627397	A549	lung:	n/a	n/a
18	CTCF	chrX:153627153-153627377	MCF-7	breast:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
19	CTCF	chrX:153627200-153627350	BJ	skin:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
20	BCLAF1	chrX:153626311-153627529	GM12878	blood:	n/a	chrX:153627240-153627253
21	TBP	chrX:153625506-153627475	HepG2	liver:	n/a	n/a
22	RCOR1	chrX:153625806-153627393	K562	blood:	n/a	n/a
23	NRF1	chrX:153625862-153627445	SK-N-SH	brain:	n/a	chrX:153626558-153626569 chrX:153626582-153626593
24	CTCF	chrX:153627160-153627310	NB4	blood:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
25	CTCF	chrX:153627115-153627402	GM19239	blood:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
26	MAZ	chrX:153625300-153628574	IMR90	lung:	n/a	chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627199-153627208 chrX:153627314-153627321 chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627313-153627323
27	POLR2A	chrX:153625239-153628974	HUVEC	blood vessel:	n/a	n/a
28	CTCF	chrX:153627220-153627370	GM12872	blood:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
29	POLR2A	chrX:153625335-153631207	MCF10A-Er-Src	breast:	n/a	n/a
30	POLR2A	chrX:153625822-153628694	HEK293	kidney:	n/a	n/a
31	CTCF	chrX:153627220-153627370	HBMEC	blood vessel:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
32	CTCF	chrX:153627137-153627367	SK-N-SH_RA	brain:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
33	MAX	chrX:153625679-153627668	MCF-7	breast:	n/a	chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627199-153627208 chrX:153627313-153627323 chrX:153627314-153627321 chrX:153627312-153627323 chrX:153627313-153627322 chrX:153627313-153627323
34	POLR2A	chrX:153625668-153627388	H1-hESC	embryonic stem cell:	n/a	n/a
35	CTCF	chrX:153627118-153627389	MCF-7	breast:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
36	CTCF	chrX:153627106-153627382	GM10266	blood:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
37	SMC3	chrX:153626475-153627471	K562	blood:	n/a	n/a
38	KAP1	chrX:153626081-153627744	U2OS	brain:	n/a	n/a
39	POLR2A	chrX:153625646-153631123	Hela-S3	cervix:	n/a	n/a
40	BCL3	chrX:153626271-153627766	A549	lung:	n/a	chrX:153627240-153627253
41	CTCF	chrX:153627128-153627368	GM13977	blood:	n/a	chrX:153627259-153627277 chrX:153627260-153627276
42	TAF1	chrX:153625739-153627327	ECC-1	luminal epithelium:	n/a	n/a
43	ZNF143	chrX:153626342-153627407	Hela-S3	cervix:	n/a	n/a
44	ELF1	chrX:153625947-153627476	MCF-7	breast:	n/a	n/a
45	JUND	chrX:153627146-153627360	H1-hESC	embryonic stem cell:	n/a	n/a
46	USF2	chrX:153626307-153627478	GM12878	blood:	n/a	chrX:153627312-153627323
47	GATA3	chrX:153625454-153627519	A549	lung:	n/a	n/a
48	USF2	chrX:153626282-153628625	Hela-S3	cervix:	n/a	chrX:153627312-153627323
49	RELA	chrX:153625520-153627604	GM15510	blood:	n/a	n/a
50	MTA3	chrX:153625357-153628684	GM12878	blood:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chrX:153627273-153627323	K562	blood:	n/a
2	chrX:153627273-153627323	HUVEC	blood vessel:	n/a
3	chrX:153627273-153627323	HRCEpiC	kidney:	n/a
4	chrX:153627273-153627323	BJ	skin:	n/a
5	chrX:153627273-153627323	GM19239	blood:	n/a
6	chrX:153627273-153627323	NH-A	brain:	n/a
7	chrX:153627273-153627323	PrEC	prostate:	n/a
8	chrX:153627273-153627323	HPAEpiC	pulmonary alveolar:	n/a
9	chrX:153627273-153627323	PFSK-1	brain:	n/a
10	chrX:153627273-153627323	AG09319	gingival:	n/a
11	chrX:153627273-153627323	SK-N-MC	brain:	n/a
12	chrX:153627273-153627323	HCPEpiC	choroid plexus:	n/a
13	chrX:153627273-153627323	SKMC	muscle:	n/a
14	chrX:153627273-153627323	AG04450	lung:	fetal
15	chrX:153627273-153627323	A549	lung:	n/a
16	chrX:153627273-153627323	GM12878	blood:	n/a
17	chrX:153627273-153627323	SK-N-SH_RA	brain:	n/a
18	chrX:153627273-153627323	HRE	kidney:	n/a
19	chrX:153627273-153627323	IMR90	lung:	fetal
20	chrX:153627273-153627323	NT2-D1	testis:	n/a
21	chrX:153627273-153627323	H1-hESC	embryonic stem cell:	embryo
22	chrX:153627273-153627323	HAEpiC	amniotic membrane:	n/a
23	chrX:153627273-153627323	MCF10A-Er-Src	breast:	n/a
24	chrX:153627273-153627323	HEEpiC	esophagus:	n/a
25	chrX:153627273-153627323	RPTEC	kidney:	n/a
26	chrX:153627273-153627323	CMK	blood:	n/a
27	chrX:153627273-153627323	HCF	heart:	n/a
28	chrX:153627273-153627323	GM06990	blood:	n/a
29	chrX:153627273-153627323	HL-60	blood:	n/a
30	chrX:153627273-153627323	HMEC	breast:	n/a
31	chrX:153627273-153627323	SK-N-SH	brain:	n/a
32	chrX:153627273-153627323	AG10803	skin:	n/a
33	chrX:153627273-153627323	SAEC	small airway:	n/a
34	chrX:153627273-153627323	HIPEpiC	eye:	n/a
35	chrX:153627273-153627323	AoSMC	blood vessel:	n/a
36	chrX:153627273-153627323	HRPEpiC	eye:	n/a
37	chrX:153627273-153627323	ProgFib	skin:	n/a
38	chrX:153627273-153627323	AG09309	skin:	n/a
39	chrX:153627273-153627323	ovcar-3	ovarian:	n/a
40	chrX:153627273-153627323	HCT-116	colon:	n/a
41	chrX:153627273-153627323	HEK293	kidney:	embryo
42	chrX:153627273-153627323	HNPCEpiC	eye:	n/a
43	chrX:153627273-153627323	AG04449	skin:	fetal
44	chrX:153627273-153627323	Caco-2	colon:	n/a
45	chrX:153627273-153627323	NB4	blood:	n/a
46	chrX:153627273-153627323	HCM	heart:	n/a
47	chrX:153627273-153627323	BE2_C	brain:	n/a
48	chrX:153627273-153627323	T-47D	breast:	n/a
49	chrX:153627273-153627323	LNCaP	prostate:	n/a
50	chrX:153627273-153627323	Jurkat	blood:	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:153284396..153286252-chrX:153625744..153627759,3	K562	blood:
2	chr15:44828896..44829631-chrX:153626751..153627511,2	HCT-116	colon:
3	chrX:153624383..153633652-chrX:153704408..153721325,48	MCF-7	breast:
4	chrX:153625463..153630462-chrX:153744222..153748220,7	K562	blood:
5	chrX:153580991..153583876-chrX:153626636..153628622,3	K562	blood:
6	X:153625659-153635385..X:153719993-153730954	GM12878	blood:
7	chrX:153624019..153633071-chrX:153652023..153663795,26	MCF-7	breast:
8	chrX:153625830..153633897-chrX:153767392..153772063,11	K562	blood:
9	chr2:74775602..74777340-chrX:153625659..153627602,2	MCF-7	breast:
10	chr14:69864750..69865963-chrX:153626613..153627599,3	Hela-S3	cervix:
11	chrX:153626896..153627411-chrX:153656799..153657406,2	MCF-7	breast:
12	chrX:153625623..153631615-chrX:153684928..153690706,13	K562	blood:
13	chrX:153625092..153628095-chrX:153742343..153746909,6	K562	blood:
14	chrX:153625525..153632382-chrX:153663983..153668753,13	K562	blood:
15	chr10:114206356..114207211-chrX:153626694..153627341,2	Hela-S3	cervix:
16	chrX:153624581..153628414-chrX:153743394..153746552,8	MCF-7	breast:
17	chrX:153236571..153238114-chrX:153626626..153628138,2	K562	blood:
18	chrX:153624113..153628937-chrX:153667362..153675322,17	MCF-7	breast:
19	chrX:153582162..153585045-chrX:153627001..153630604,4	K562	blood:
20	chrX:153625731..153628141-chrX:153991009..153993068,2	K562	blood:
21	X:153625659-153635385..X:154053104-154056925	GM12878	blood:
22	chrX:153361716..153363371-chrX:153626591..153628613,2	K562	blood:
23	chrX:153235275..153239304-chrX:153624971..153627980,7	K562	blood:
24	chrX:153594250..153603496-chrX:153624447..153635089,39	K562	blood:
25	chrX:153624542..153632362-chrX:153710560..153721332,23	K562	blood:
26	chrX:153553264..153555915-chrX:153626596..153629140,2	MCF-7	breast:
27	chrX:153625784..153628444-chrX:153721433..153724368,3	K562	blood:
28	chrX:153625296..153629968-chrX:153767983..153777827,13	K562	blood:
29	chrX:153592401..153602834-chrX:153624077..153632705,30	K562	blood:
30	chrX:153586062..153591083-chrX:153626549..153633665,7	K562	blood:
31	chrX:153589749..153593793-chrX:153626284..153628213,4	MCF-7	breast:
32	chrX:153626135..153631801-chrX:153703936..153709269,13	K562	blood:
33	chrX:153625254..153633054-chrX:153663966..153667311,10	MCF-7	breast:
34	chrX:153624567..153628166-chrX:153772694..153776749,9	K562	blood:
35	X:153625659-153635385..X:153657611-153671976	H1-hESC	embryonic stem cell:	embryo
36	chrX:153625628..153632278-chrX:153692369..153698999,8	K562	blood:
37	chr12:46764362..46765489-chrX:153626330..153627477,3	Hela-S3	cervix:
38	X:153625659-153635385..X:154119150-154130142	GM12878	blood:
39	chr1:28832093..28833193-chrX:153626402..153627317,3	Hela-S3	cervix:
40	X:153625659-153635385..X:154140465-154148278	K562	blood:
41	chrX:153192734..153195592-chrX:153625639..153627595,2	MCF-7	breast:
42	chrX:153586997..153589910-chrX:153626085..153628090,2	MCF-7	breast:
43	chrX:153625197..153632179-chrX:153731627..153740154,10	K562	blood:
44	chrX:153624545..153632466-chrX:153709449..153721332,27	K562	blood:
45	chrX:153625011..153628689-chrX:153675821..153678594,3	MCF-7	breast:
46	chrX:153625410..153630111-chrX:153684839..153690625,12	K562	blood:
47	chrX:153624619..153634737-chrX:153752670..153765167,48	K562	blood:
48	chrX:153626573..153628178-chrX:153978925..153981640,2	K562	blood:
49	chrX:153624391..153630513-chrX:153767458..153777755,28	MCF-7	breast:
50	chrX:153594620..153614384-chrX:153624179..153643019,157	MCF-7	breast:

Variant related genes	Relation type
SNORA70	TF binding region
RPL10	TF binding region
RPL10	CpG island
SNORA70	CpG island
ENSG00000172534	Chromatin interaction
ENSG00000258096	Chromatin interaction
ENSG00000104131	Chromatin interaction
ENSG00000177854	Chromatin interaction
ENSG00000234183	Chromatin interaction
ENSG00000237859	Chromatin interaction
ENSG00000007350	Chromatin interaction
ENSG00000102178	Chromatin interaction
ENSG00000126903	Chromatin interaction
ENSG00000130827	Chromatin interaction
ENSG00000242125	Chromatin interaction
ENSG00000115318	Chromatin interaction
ENSG00000196976	Chromatin interaction
ENSG00000180198	Chromatin interaction
ENSG00000071553	Chromatin interaction
ENSG00000071859	Chromatin interaction
ENSG00000203870	Chromatin interaction
ENSG00000224069	Chromatin interaction
ENSG00000134294	Chromatin interaction
ENSG00000264631	Chromatin interaction
ENSG00000184216	Chromatin interaction
ENSG00000023041	Chromatin interaction
ENSG00000151532	Chromatin interaction
ENSG00000211524	Chromatin interaction
ENSG00000102119	Chromatin interaction
ENSG00000264783	Chromatin interaction
ENSG00000160211	Chromatin interaction
ENSG00000073009	Chromatin interaction
ENSG00000160219	Chromatin interaction
ENSG00000179523	Chromatin interaction
ENSG00000071889	Chromatin interaction
ENSG00000100632	Chromatin interaction
ENSG00000130826	Chromatin interaction
ENSG00000029364	Chromatin interaction
ENSG00000264484	Chromatin interaction
ENSG00000261773	Chromatin interaction
ENSG00000169057	Chromatin interaction
ENSG00000197180	Chromatin interaction
ENSG00000196924	Chromatin interaction
ENSG00000089820	Chromatin interaction
ENSG00000154359	Chromatin interaction
ENSG00000115325	Chromatin interaction
ENSG00000105968	Chromatin interaction
ENSG00000203879	Chromatin interaction

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1130929	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11593	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.85[TSI][hapmap]
rs12559	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12877	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2051508	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap]
rs2070643	0.87[JPT][hapmap]
rs2070807	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.85[TSI][hapmap]
rs2070819	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap]
rs2070825	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];1.00[TSI][hapmap];0.84[YRI][hapmap]
rs2070827	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap]
rs2070829	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2097214	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2156911	1.00[CEU][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap]
rs2239469	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2283762	0.92[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap]
rs28602900	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.85[TSI][hapmap]
rs4898484	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4898494	1.00[CEU][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap]
rs6727	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs743547	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs743548	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap]
rs743549	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.85[TSI][hapmap]
rs762514	1.00[CEU][hapmap]
rs7886627	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs915941	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap]
rs915942	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531227	chrX:152864376-153655730	Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	245 gene(s)	inside rSNPs	diseases
2	esv33199	chrX:152864376-153820241	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	276 gene(s)	inside rSNPs	diseases
3	nsv528291	chrX:152864376-153827637	Weak transcription Active TSS Bivalent Enhancer Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	277 gene(s)	inside rSNPs	diseases
4	nsv915605	chrX:153333946-153783638	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	204 gene(s)	inside rSNPs	diseases
5	nsv519042	chrX:153348431-153829693	Flanking Active TSS Weak transcription Genic enhancers Active TSS Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	207 gene(s)	inside rSNPs	diseases
6	nsv532962	chrX:153564946-153870337	Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	199 gene(s)	inside rSNPs	diseases
7	nsv532963	chrX:153576890-153822717	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	195 gene(s)	inside rSNPs	diseases
8	nsv817569	chrX:153592317-153634020	Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	151 gene(s)	inside rSNPs	diseases
9	nsv530281	chrX:153622940-153783184	Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	153 gene(s)	inside rSNPs	diseases
10	nsv532964	chrX:153622940-153854307	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	158 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:153624800-153627400	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chrX:153624800-153627400	Active TSS	iPS-15b Cell Line	embryonic stem cell
3	chrX:153624800-153627400	Active TSS	Fetal Intestine Large	intestine
4	chrX:153624800-153627600	Active TSS	Pancreas	Pancrea
5	chrX:153624800-153630000	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
6	chrX:153625200-153627400	Active TSS	H1 Cell Line	embryonic stem cell
7	chrX:153625200-153627400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chrX:153625200-153627400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chrX:153625200-153627400	Active TSS	HUES48 Cell Line	embryonic stem cell
10	chrX:153625200-153627400	Active TSS	HUES64 Cell Line	embryonic stem cell
11	chrX:153625200-153627400	Active TSS	iPS-18 Cell Line	embryonic stem cell
12	chrX:153625200-153627400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
13	chrX:153625200-153627400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chrX:153625200-153627400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chrX:153625200-153627400	Active TSS	Brain Hippocampus Middle	brain
16	chrX:153625200-153627400	Active TSS	Fetal Kidney	kidney
17	chrX:153625200-153627400	ZNF genes & repeats	Fetal Stomach	stomach
18	chrX:153625200-153627400	Active TSS	Rectal Mucosa Donor 29	rectum
19	chrX:153625200-153627400	Active TSS	Rectal Mucosa Donor 31	rectum
20	chrX:153625200-153627400	Active TSS	HepG2	liver
21	chrX:153625200-153627400	Active TSS	HSMM	muscle
22	chrX:153625200-153627600	Active TSS	Liver	Liver
23	chrX:153625200-153627800	Active TSS	Duodenum Smooth Muscle	Duodenum
24	chrX:153625200-153628200	Active TSS	Right Ventricle	heart
25	chrX:153625200-153628600	Active TSS	Pancreatic Islets	Pancreatic Islet
26	chrX:153625200-153628600	Active TSS	Psoas Muscle	Psoas
27	chrX:153625200-153628800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
28	chrX:153625400-153627400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
29	chrX:153625400-153627400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
30	chrX:153625400-153627400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chrX:153625400-153627400	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
32	chrX:153625400-153627400	Active TSS	Primary T killer memory cells from peripheral blood	blood
33	chrX:153625400-153627400	Active TSS	Brain Angular Gyrus	brain
34	chrX:153625400-153627400	Active TSS	Brain Anterior Caudate	brain
35	chrX:153625400-153627400	Active TSS	Brain Inferior Temporal Lobe	brain
36	chrX:153625400-153627400	Active TSS	Duodenum Mucosa	Duodenum
37	chrX:153625400-153627400	Active TSS	Fetal Lung	lung
38	chrX:153625400-153627400	Active TSS	Left Ventricle	heart
39	chrX:153625400-153627400	Active TSS	Hela-S3	cervix
40	chrX:153625400-153627400	Active TSS	HSMMtube	muscle
41	chrX:153625400-153627400	Active TSS	HUVEC	blood vessel
42	chrX:153625400-153627400	Active TSS	K562	blood
43	chrX:153625400-153627400	Active TSS	NH-A	brain
44	chrX:153625400-153627400	Active TSS	NHLF	lung
45	chrX:153625400-153627600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chrX:153625400-153627600	Active TSS	Primary T helper naive cells from peripheral blood	blood
47	chrX:153625400-153627600	Active TSS	Esophagus	oesophagus
48	chrX:153625400-153627600	Active TSS	Gastric	stomach
49	chrX:153625400-153627600	Active TSS	Sigmoid Colon	Sigmoid Colon
50	chrX:153625400-153627600	Active TSS	GM12878-XiMat	blood

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