Variant report

Variant	rs2073797
Chromosome Location	chr11:64511050-64511051
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:64511045-64511371	GM10248	blood:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
2	RAD21	chr11:64511045-64511418	GM12878	blood:	n/a	chr11:64511205-64511217 chr11:64511203-64511222
3	SPI1	chr11:64510405-64511350	HL-60	blood:	n/a	n/a
4	RAD21	chr11:64510133-64512065	SK-N-SH	brain:	n/a	chr11:64511012-64511025 chr11:64510945-64510958 chr11:64511205-64511217 chr11:64511203-64511222 chr11:64512029-64512041
5	TEAD4	chr11:64510611-64511743	ECC-1	luminal epithelium:	n/a	n/a
6	MAZ	chr11:64509811-64513853	K562	blood:	n/a	chr11:64512748-64512757 chr11:64512445-64512454 chr11:64512631-64512641 chr11:64510447-64510457 chr11:64513619-64513629 chr11:64513719-64513729
7	POLR2A	chr11:64511016-64511967	K562	blood:	n/a	n/a
8	CTCF	chr11:64511041-64511523	GM19240	blood:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
9	CTBP2	chr11:64509270-64511435	H1-hESC	embryonic stem cell:	n/a	n/a
10	TEAD4	chr11:64510744-64511262	H1-hESC	embryonic stem cell:	n/a	n/a
11	MAX	chr11:64511049-64512031	NB4	blood:	n/a	n/a
12	HCFC1	chr11:64509885-64511318	Hela-S3	cervix:	n/a	n/a
13	CREB1	chr11:64511041-64511305	A549	lung:	n/a	n/a
14	CTCF	chr11:64511038-64511738	GM12892	blood:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
15	ZC3H11A	chr11:64511029-64511306	K562	blood:	n/a	n/a
16	CTCF	chr11:64511008-64511391	K562	blood:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
17	NR2F2	chr11:64510989-64511497	K562	blood:	n/a	n/a
18	MAX	chr11:64509884-64513844	K562	blood:	n/a	chr11:64512748-64512757 chr11:64512445-64512454 chr11:64512631-64512641 chr11:64510447-64510457 chr11:64513619-64513629 chr11:64513719-64513729
19	CTCF	chr11:64511040-64511190	HFF-Myc	foreskin:	n/a	n/a
20	RAD21	chr11:64511031-64511353	SK-N-SH_RA	brain:	n/a	chr11:64511205-64511217 chr11:64511203-64511222
21	MYC	chr11:64510352-64511985	K562	blood:	n/a	chr11:64510447-64510457
22	TEAD4	chr11:64510709-64511352	K562	blood:	n/a	n/a
23	CTCF	chr11:64510965-64511487	MCF-7	breast:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
24	RAD21	chr11:64510984-64511610	HCT-116	colon:	n/a	chr11:64511012-64511025 chr11:64511205-64511217 chr11:64511203-64511222
25	TEAD4	chr11:64510756-64511224	H1-hESC	embryonic stem cell:	n/a	n/a
26	RCOR1	chr11:64510394-64511568	GM12878	blood:	n/a	n/a
27	POLR2A	chr11:64511045-64513691	Raji	blood:	n/a	n/a
28	SMARCB1	chr11:64511035-64511439	K562	blood:	n/a	n/a
29	HDAC2	chr11:64511000-64511372	K562	blood:	n/a	n/a
30	CTCF	chr11:64511023-64511364	HepG2	liver:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
31	MAZ	chr11:64509820-64511530	IMR90	lung:	n/a	chr11:64510447-64510457
32	RAD21	chr11:64511048-64511352	K562	blood:	n/a	chr11:64511205-64511217 chr11:64511203-64511222
33	CTCF	chr11:64511040-64511342	H1-hESC	embryonic stem cell:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
34	SMC3	chr11:64510149-64511691	SK-N-SH	brain:	n/a	chr11:64510493-64510507
35	YY1	chr11:64511047-64511402	H1-hESC	embryonic stem cell:	n/a	n/a
36	CTCF	chr11:64510846-64511548	K562	blood:	n/a	chr11:64511203-64511219 chr11:64510949-64510958 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64510946-64510959 chr11:64511205-64511218
37	RAD21	chr11:64510951-64511507	H1-hESC	embryonic stem cell:	n/a	chr11:64511012-64511025 chr11:64511205-64511217 chr11:64511203-64511222
38	POLR2A	chr11:64508984-64513948	HL-60	blood:	n/a	n/a
39	CTCF	chr11:64511024-64511369	Spleen_OC	spleen:	n/a	chr11:64511203-64511219 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64511205-64511218
40	CTCF	chr11:64510221-64511558	HCT-116	colon:	n/a	chr11:64511203-64511219 chr11:64510949-64510958 chr11:64510690-64510703 chr11:64511202-64511220 chr11:64511205-64511218 chr11:64510494-64510504 chr11:64510492-64510508 chr11:64510491-64510509 chr11:64510946-64510959 chr11:64511205-64511218 chr11:64510497-64510506
41	POLR2A	chr11:64511048-64511290	HCT-116	colon:	n/a	n/a
42	REST	chr11:64510785-64511235	K562	blood:	n/a	chr11:64511147-64511160 chr11:64511153-64511166 chr11:64511144-64511157
43	JUND	chr11:64510374-64511531	K562	blood:	n/a	chr11:64510482-64510491
44	RAD21	chr11:64510985-64511439	H1-hESC	embryonic stem cell:	n/a	chr11:64511012-64511025 chr11:64511205-64511217 chr11:64511203-64511222
45	RCOR1	chr11:64509845-64512147	K562	blood:	n/a	n/a
46	TFAP2A	chr11:64510190-64511319	Hela-S3	cervix:	n/a	chr11:64510826-64510840 chr11:64510826-64510840 chr11:64510962-64510973 chr11:64510962-64510973 chr11:64510947-64510959 chr11:64510461-64510473 chr11:64510826-64510840 chr11:64510962-64510973 chr11:64510828-64510838 chr11:64510461-64510473 chr11:64510461-64510473 chr11:64510828-64510838 chr11:64510962-64510973 chr11:64510947-64510959 chr11:64510828-64510838 chr11:64510461-64510473 chr11:64510463-64510478
47	RAD21	chr11:64510919-64511499	ECC-1	luminal epithelium:	n/a	chr11:64511012-64511025 chr11:64510945-64510958 chr11:64511205-64511217 chr11:64511203-64511222
48	ZBTB7A	chr11:64510181-64511804	K562	blood:	n/a	chr11:64510902-64510911
49	MAX	chr11:64509967-64512087	A549	lung:	n/a	chr11:64510447-64510457
50	ZMIZ1	chr11:64510264-64511499	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:64508515..64511238-chr11:64521497..64525046,4	MCF-7	breast:
2	chr11:64509047..64511433-chr11:64527648..64529214,2	MCF-7	breast:
3	chr11:64507790..64516181-chr11:64524582..64537783,30	K562	blood:
4	chr11:64510149..64512039-chr11:64538219..64540894,2	MCF-7	breast:
5	chr11:64510615..64511340-chr17:46047851..46048383,2	MCF-7	breast:
6	chr11:64503034..64505808-chr11:64508705..64511765,4	MCF-7	breast:
7	chr11:64510798..64511324-chr11:64535005..64535845,2	MCF-7	breast:
8	chr11:64506030..64508610-chr11:64510560..64513523,3	MCF-7	breast:
9	chr11:64489351..64492621-chr11:64507509..64512935,5	K562	blood:
10	chr11:64124497..64126994-chr11:64509396..64512374,2	K562	blood:
11	chr11:64509857..64513722-chr11:64571129..64574033,3	MCF-7	breast:
12	chr11:64509755..64511903-chr11:65684738..65686627,2	K562	blood:
13	chr11:64510354..64515027-chr11:64543156..64548358,11	K562	blood:
14	chr11:64489616..64492284-chr11:64509871..64511516,3	K562	blood:
15	chr11:64509463..64511820-chr11:64545145..64547148,2	MCF-7	breast:

Variant related genes	Relation type
RASGRP2	TF binding region
ENSG00000108465	Chromatin interaction
ENSG00000168066	Chromatin interaction
ENSG00000133895	Chromatin interaction
ENSG00000110076	Chromatin interaction
ENSG00000162302	Chromatin interaction
ENSG00000175573	Chromatin interaction
ENSG00000068976	Chromatin interaction
ENSG00000269038	Chromatin interaction
ENSG00000068831	Chromatin interaction

Extended variants
information (count: 64 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10897524	0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11231859	0.88[EUR][1000 genomes]
rs1207113	0.90[ASN][1000 genomes]
rs1207181	0.90[ASN][1000 genomes]
rs12223914	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1633462	0.83[EUR][1000 genomes]
rs2003293	0.88[EUR][1000 genomes]
rs2073798	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2230414	0.88[EUR][1000 genomes]
rs2267918	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2284301	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2375335	0.86[EUR][1000 genomes]
rs2959652	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3809076	0.83[EUR][1000 genomes]
rs474707	0.85[EUR][1000 genomes]
rs477549	0.86[EUR][1000 genomes]
rs483962	0.88[EUR][1000 genomes]
rs487105	0.83[EUR][1000 genomes]
rs490980	0.83[EUR][1000 genomes]
rs494128	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs496914	0.90[EUR][1000 genomes]
rs523200	0.85[EUR][1000 genomes]
rs532747	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs547066	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs555974	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs569602	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs580374	0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58483071	0.88[EUR][1000 genomes]
rs589691	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs593394	0.83[EUR][1000 genomes]
rs620006	0.85[EUR][1000 genomes]
rs625172	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs630966	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs633923	0.85[EUR][1000 genomes]
rs637332	0.88[EUR][1000 genomes]
rs667237	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs673224	0.80[EUR][1000 genomes]
rs674297	0.81[EUR][1000 genomes]
rs680273	0.82[EUR][1000 genomes]
rs686171	0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72643567	0.82[EUR][1000 genomes]
rs72643568	0.82[EUR][1000 genomes]
rs7938455	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468596	chr11:64334114-64527080	Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv555195	chr11:64334114-64527080	Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
3	nsv897694	chr11:64334114-64584959	Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
4	nsv818842	chr11:64345448-64546391	Bivalent Enhancer Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
5	nsv528506	chr11:64345448-64701030	Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1075 gene(s)	inside rSNPs	diseases
6	nsv555196	chr11:64357072-64559898	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
7	nsv897695	chr11:64357072-64701030	Weak transcription Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1075 gene(s)	inside rSNPs	diseases
8	nsv1051350	chr11:64372906-64533632	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
9	nsv555198	chr11:64373899-64573589	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
10	esv1804443	chr11:64386453-64534785	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
11	nsv897697	chr11:64447420-64584959	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
12	nsv897698	chr11:64447420-64621573	Active TSS Bivalent Enhancer Genic enhancers Enhancers Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	82 gene(s)	inside rSNPs	diseases
13	nsv897699	chr11:64447420-64638041	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	83 gene(s)	inside rSNPs	diseases
14	nsv897700	chr11:64447420-64701030	Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1071 gene(s)	inside rSNPs	diseases
15	nsv555202	chr11:64477050-64573589	Strong transcription Bivalent/Poised TSS Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
16	nsv468597	chr11:64477050-64584959	Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
17	nsv468598	chr11:64477050-64584959	Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
18	nsv555203	chr11:64477050-64584959	Strong transcription Genic enhancers Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
19	nsv1049744	chr11:64486615-64630149	Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
20	nsv832189	chr11:64487183-64620199	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
21	nsv897701	chr11:64501991-64520569	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2073797	SF1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64508600-64513000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
2	chr11:64508800-64512000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
3	chr11:64509000-64511400	Active TSS	H9 Cell Line	embryonic stem cell
4	chr11:64509000-64512000	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
5	chr11:64509200-64511200	Flanking Active TSS	Stomach Smooth Muscle	stomach
6	chr11:64509200-64511800	Bivalent Enhancer	Fetal Brain Male	brain
7	chr11:64509200-64512000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr11:64509200-64512000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
9	chr11:64509200-64512600	Active TSS	Brain Anterior Caudate	brain
10	chr11:64509400-64511200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr11:64509400-64511200	Active TSS	Brain Substantia Nigra	brain
12	chr11:64509400-64511200	Active TSS	Rectal Smooth Muscle	rectum
13	chr11:64509400-64511800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr11:64509400-64512000	Flanking Active TSS	Primary B cells from cord blood	blood
15	chr11:64509400-64512000	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
16	chr11:64509400-64512000	Flanking Active TSS	Right Ventricle	heart
17	chr11:64509400-64512000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
18	chr11:64509400-64512200	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr11:64509400-64513600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
20	chr11:64509600-64511200	Enhancers	Dnd41	blood
21	chr11:64509600-64511400	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
22	chr11:64509600-64511400	Active TSS	Psoas Muscle	Psoas
23	chr11:64509600-64511600	Bivalent Enhancer	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr11:64509600-64511600	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr11:64509600-64511800	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr11:64509600-64512000	Flanking Active TSS	Primary hematopoietic stem cells	blood
27	chr11:64509600-64512000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr11:64509600-64512000	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
29	chr11:64509600-64512000	Flanking Active TSS	Spleen	Spleen
30	chr11:64509600-64512200	Flanking Bivalent TSS/Enh	Fetal Muscle Leg	muscle
31	chr11:64509600-64512400	Bivalent Enhancer	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr11:64509600-64512600	Enhancers	Fetal Heart	heart
33	chr11:64509600-64513600	Active TSS	Left Ventricle	heart
34	chr11:64509800-64511400	Active TSS	Small Intestine	intestine
35	chr11:64509800-64512000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
36	chr11:64509800-64513200	Active TSS	Primary T killer memory cells from peripheral blood	blood
37	chr11:64509800-64513600	Active TSS	Right Atrium	heart
38	chr11:64509800-64514000	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
39	chr11:64510000-64511200	Active TSS	Primary monocytes fromperipheralblood	blood
40	chr11:64510000-64511200	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
41	chr11:64510000-64511400	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
42	chr11:64510000-64511400	Active TSS	Colon Smooth Muscle	Colon
43	chr11:64510000-64511600	Flanking Active TSS	Pancreas	Pancrea
44	chr11:64510000-64512000	Flanking Bivalent TSS/Enh	Brain Germinal Matrix	brain
45	chr11:64510000-64512200	Flanking Active TSS	Thymus	Thymus
46	chr11:64510000-64513400	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
47	chr11:64510000-64513400	Active TSS	Aorta	Aorta
48	chr11:64510000-64513600	Active TSS	Primary T cells from cord blood	blood
49	chr11:64510200-64511400	Active TSS	Primary T helper naive cells fromperipheralblood	blood
50	chr11:64510200-64511400	Bivalent Enhancer	Fetal Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links