The 2.0 version of rSNPBase

Variant report

Variant rs2080752
Chromosome Location chr12:46143444-46143445
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:46125000-46161200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr12:46125200-46146400 Weak transcription Left Ventricle heart
3 chr12:46125200-46156000 Weak transcription Small Intestine intestine
4 chr12:46125400-46152200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr12:46126400-46146000 Weak transcription Right Ventricle heart
6 chr12:46126400-46149600 Weak transcription Right Atrium heart
7 chr12:46126400-46161200 Weak transcription Aorta Aorta
8 chr12:46127200-46147600 Weak transcription Colonic Mucosa Colon
9 chr12:46127200-46150400 Weak transcription NHLF lung
10 chr12:46127200-46161200 Weak transcription HMEC breast
11 chr12:46127400-46144400 Weak transcription NH-A brain
12 chr12:46127400-46147600 Weak transcription Fetal Heart heart
13 chr12:46127400-46153600 Weak transcription Muscle Satellite Cultured Cells --
14 chr12:46127400-46154800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr12:46127400-46156000 Weak transcription Adipose Nuclei Adipose
16 chr12:46127800-46149000 Weak transcription Brain Substantia Nigra brain
17 chr12:46128000-46148000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr12:46128200-46164600 Weak transcription Esophagus oesophagus
19 chr12:46129200-46156600 Weak transcription HepG2 liver
20 chr12:46129400-46156000 Weak transcription Brain Angular Gyrus brain
21 chr12:46129600-46144800 Weak transcription Rectal Smooth Muscle rectum
22 chr12:46129600-46145400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr12:46130000-46147800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr12:46130400-46147600 Weak transcription Osteobl bone
25 chr12:46131200-46149200 Weak transcription Placenta Placenta
26 chr12:46131200-46149800 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr12:46131200-46160800 Weak transcription NHEK skin
28 chr12:46131400-46145000 Weak transcription Gastric stomach
29 chr12:46131400-46145200 Weak transcription Colon Smooth Muscle Colon
30 chr12:46131400-46156200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr12:46131600-46147000 Weak transcription Primary monocytes fromperipheralblood blood
32 chr12:46131600-46150600 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr12:46131800-46156000 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr12:46132000-46161800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr12:46132000-46205200 Weak transcription HSMM muscle
36 chr12:46132200-46165000 Weak transcription Lung lung
37 chr12:46135400-46155400 Weak transcription HUVEC blood vessel
38 chr12:46135600-46150400 Weak transcription H1 Cell Line embryonic stem cell
39 chr12:46136200-46148000 Weak transcription Fetal Brain Female brain
40 chr12:46136200-46148600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr12:46136400-46150800 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr12:46136400-46159400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr12:46136600-46143600 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr12:46136600-46144400 Weak transcription Primary B cells from cord blood blood
45 chr12:46136600-46157800 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr12:46136800-46150800 Weak transcription Fetal Lung lung
47 chr12:46136800-46151000 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr12:46136800-46151200 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr12:46136800-46153200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr12:46136800-46156200 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015