Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10744734	0.85[EUR][1000 genomes]
rs10774483	0.89[CEU][hapmap];0.89[EUR][1000 genomes]
rs10774485	0.86[EUR][1000 genomes]
rs1525953	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs1525954	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs1525959	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs1525971	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1880696	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs2030829	0.88[CEU][hapmap];0.87[EUR][1000 genomes]
rs2393467	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs3921268	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs4354749	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4429121	0.82[EUR][1000 genomes]
rs4767761	0.88[CEU][hapmap];0.93[EUR][1000 genomes]
rs6490223	0.87[CEU][hapmap];0.83[AMR][1000 genomes]
rs7138083	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7298367	0.86[EUR][1000 genomes]
rs7302780	0.88[CEU][hapmap];0.89[EUR][1000 genomes]
rs7311043	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7953473	0.88[EUR][1000 genomes]
rs7980820	0.89[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1041602	chr12:119472215-119499329	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:119474400-119479400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr12:119474800-119479600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr12:119475000-119487800	Weak transcription	Brain Germinal Matrix	brain
4	chr12:119475200-119477200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr12:119475200-119505800	Weak transcription	Fetal Brain Female	brain

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