Variant report

Variant rs2105495
Chromosome Location chr21:48001880-48001881
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:47991400-48002000 Weak transcription Colonic Mucosa Colon
2 chr21:47991400-48005600 Weak transcription Psoas Muscle Psoas
3 chr21:47993000-48002200 Weak transcription Placenta Amnion Placenta Amnion
4 chr21:47993000-48003000 Weak transcription NHLF lung
5 chr21:47993000-48005200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr21:47993200-48004200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr21:47993400-48005000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr21:47993400-48006600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr21:47998400-48003800 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr21:47998400-48004000 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr21:47999000-48006000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr21:47999200-48003400 Weak transcription Fetal Intestine Large intestine
13 chr21:47999400-48003200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
14 chr21:47999800-48005400 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr21:48000000-48003200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr21:48000200-48002600 ZNF genes & repeats Liver Liver
17 chr21:48000200-48003800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr21:48000600-48005400 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr21:48000800-48002400 ZNF genes & repeats Primary B cells from cord blood blood
20 chr21:48000800-48002600 ZNF genes & repeats Primary T cells from cord blood blood
21 chr21:48000800-48002600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr21:48000800-48002600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
23 chr21:48001000-48002200 Strong transcription Primary T cells fromperipheralblood blood
24 chr21:48001000-48002200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr21:48001000-48002600 Strong transcription Brain Hippocampus Middle brain
26 chr21:48001000-48002800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
27 chr21:48001000-48003200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
28 chr21:48001200-48002200 Strong transcription Brain Inferior Temporal Lobe brain
29 chr21:48001200-48002400 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
30 chr21:48001200-48002400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr21:48001200-48002400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr21:48001200-48002600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
33 chr21:48001200-48002600 Strong transcription Colon Smooth Muscle Colon
34 chr21:48001200-48002600 ZNF genes & repeats Fetal Muscle Leg muscle
35 chr21:48001200-48002600 ZNF genes & repeats Fetal Stomach stomach
36 chr21:48001200-48002600 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
37 chr21:48001200-48002600 Strong transcription Skeletal Muscle Female skeletal muscle
38 chr21:48001200-48002800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
39 chr21:48001200-48003800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr21:48001200-48004000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr21:48001400-48002200 ZNF genes & repeats Fetal Intestine Small intestine
42 chr21:48001400-48002200 Strong transcription HSMMtube muscle
43 chr21:48001400-48002400 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr21:48001400-48002600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
45 chr21:48001400-48002600 ZNF genes & repeats Aorta Aorta
46 chr21:48001400-48002600 Strong transcription Brain Cingulate Gyrus brain
47 chr21:48001400-48002600 ZNF genes & repeats Fetal Muscle Trunk muscle
48 chr21:48001400-48002800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
49 chr21:48001400-48002800 ZNF genes & repeats HMEC breast
50 chr21:48001400-48003400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain

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