Variant report

Variant	rs2107342
Chromosome Location	chr14:68995948-68995949
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs2750136	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv832822	chr14:68874640-69060272	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1048064	chr14:68991041-69012766	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68987400-68996200	Enhancers	Pancreas	Pancrea
2	chr14:68990000-68996000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr14:68992600-68996000	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr14:68993600-68996600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr14:68993800-68996000	Weak transcription	Fetal Muscle Trunk	muscle
6	chr14:68994200-68996000	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr14:68994400-69001800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr14:68994600-68996000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr14:68994800-68996000	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr14:68995000-69001200	Weak transcription	HSMMtube	muscle
11	chr14:68995400-68996200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
12	chr14:68995600-68996200	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr14:68995600-68997000	ZNF genes & repeats	Fetal Intestine Small	intestine
14	chr14:68995800-68996000	Flanking Active TSS	Colon Smooth Muscle	Colon
15	chr14:68995800-68996000	Enhancers	Stomach Mucosa	stomach
16	chr14:68995800-68996000	Weak transcription	Hela-S3	cervix
17	chr14:68995800-68996600	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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