Variant report

Variant rs2109019
Chromosome Location chr17:59475888-59475889
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:59470800-59476000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
2 chr17:59473000-59476000 Bivalent/Poised TSS Fetal Lung lung
3 chr17:59473400-59476200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr17:59473400-59476200 Bivalent/Poised TSS Psoas Muscle Psoas
5 chr17:59473400-59476400 Bivalent Enhancer Brain Germinal Matrix brain
6 chr17:59473400-59477000 Bivalent Enhancer Primary B cells from peripheral blood blood
7 chr17:59473400-59479800 Bivalent Enhancer Primary T cells fromperipheralblood blood
8 chr17:59473600-59476200 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr17:59473600-59476400 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
10 chr17:59473600-59477400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
11 chr17:59473800-59476000 Bivalent Enhancer Spleen Spleen
12 chr17:59473800-59476200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr17:59473800-59476200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr17:59474000-59476200 Bivalent/Poised TSS Fetal Kidney kidney
15 chr17:59474000-59476200 Bivalent Enhancer Stomach Mucosa stomach
16 chr17:59474000-59476200 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
17 chr17:59474200-59476000 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
18 chr17:59474200-59476200 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
19 chr17:59474200-59476200 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood
20 chr17:59474200-59476400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
21 chr17:59474200-59479000 Active TSS Aorta Aorta
22 chr17:59474200-59481000 Active TSS NHDF-Ad bronchial
23 chr17:59474400-59476200 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr17:59474400-59479800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
25 chr17:59474600-59476400 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
26 chr17:59474800-59476000 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
27 chr17:59474800-59476400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
28 chr17:59474800-59476600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
29 chr17:59474800-59476600 Flanking Bivalent TSS/Enh Fetal Stomach stomach
30 chr17:59474800-59476800 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
31 chr17:59474800-59477200 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
32 chr17:59474800-59477200 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
33 chr17:59474800-59477200 Flanking Bivalent TSS/Enh Cortex derived primary cultured neurospheres brain
34 chr17:59474800-59477200 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
35 chr17:59474800-59477400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
36 chr17:59475000-59476000 Flanking Bivalent TSS/Enh H9 Derived Neuron Cultured Cells ES cell derived
37 chr17:59475000-59476000 Bivalent/Poised TSS HSMMtube muscle
38 chr17:59475000-59476200 Bivalent Enhancer H1 Cell Line embryonic stem cell
39 chr17:59475000-59476200 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
40 chr17:59475000-59476200 Flanking Active TSS Muscle Satellite Cultured Cells --
41 chr17:59475000-59476200 Bivalent Enhancer Liver Liver
42 chr17:59475000-59476200 Bivalent Enhancer Brain Substantia Nigra brain
43 chr17:59475000-59476400 Flanking Bivalent TSS/Enh H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr17:59475000-59476400 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr17:59475000-59476400 Bivalent Enhancer Primary T helper memory cells from peripheral blood 2 blood
46 chr17:59475000-59476400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr17:59475000-59476400 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
48 chr17:59475000-59476400 Transcr. at gene 5' and 3' NHLF lung
49 chr17:59475000-59479200 Active TSS HSMM muscle
50 chr17:59475000-59480400 Bivalent/Poised TSS Fetal Intestine Small intestine

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