The 2.0 version of rSNPBase

Variant report

Variant rs2122385
Chromosome Location chr2:11362351-11362352
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11296200-11412600 Weak transcription Aorta Aorta
2 chr2:11296800-11379800 Weak transcription Small Intestine intestine
3 chr2:11297600-11394400 Weak transcription Right Ventricle heart
4 chr2:11310600-11433000 Weak transcription Pancreas Pancrea
5 chr2:11314600-11364200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr2:11315800-11367400 Weak transcription Brain Cingulate Gyrus brain
7 chr2:11319000-11364200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:11320800-11377000 Strong transcription HepG2 liver
9 chr2:11328800-11367600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr2:11329200-11364400 Strong transcription Liver Liver
11 chr2:11329200-11369200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:11333400-11386200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr2:11334400-11363600 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr2:11337000-11367400 Weak transcription Brain Angular Gyrus brain
15 chr2:11337600-11362600 Weak transcription Primary T helper naive cells from peripheral blood blood
16 chr2:11338400-11367400 Weak transcription H9 Cell Line embryonic stem cell
17 chr2:11338600-11373400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr2:11339800-11382600 Weak transcription Esophagus oesophagus
19 chr2:11340600-11369400 Weak transcription Colonic Mucosa Colon
20 chr2:11341600-11384400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr2:11344400-11368400 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr2:11345200-11364400 Strong transcription Adipose Nuclei Adipose
23 chr2:11346400-11364400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr2:11346400-11364400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr2:11346800-11362800 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr2:11346800-11364600 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr2:11346800-11366400 Strong transcription HSMM muscle
28 chr2:11352600-11411200 Weak transcription Thymus Thymus
29 chr2:11352800-11424000 Weak transcription HSMMtube muscle
30 chr2:11353200-11374800 Weak transcription Colon Smooth Muscle Colon
31 chr2:11354200-11367400 Weak transcription Brain Anterior Caudate brain
32 chr2:11354200-11376400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr2:11354400-11364400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:11354400-11382600 Weak transcription Ovary ovary
35 chr2:11354400-11388000 Weak transcription Placenta Amnion Placenta Amnion
36 chr2:11354600-11365200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr2:11354600-11369800 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr2:11354600-11423800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr2:11355200-11363200 Weak transcription Muscle Satellite Cultured Cells --
40 chr2:11355200-11363800 Weak transcription H1 Cell Line embryonic stem cell
41 chr2:11355200-11364200 Weak transcription Brain Hippocampus Middle brain
42 chr2:11355200-11379800 Weak transcription Psoas Muscle Psoas
43 chr2:11355400-11379800 Weak transcription NHEK skin
44 chr2:11355600-11364600 Weak transcription Fetal Brain Male brain
45 chr2:11355800-11365200 Weak transcription NHLF lung
46 chr2:11355800-11367400 Weak transcription Brain Substantia Nigra brain
47 chr2:11355800-11376200 Weak transcription Rectal Smooth Muscle rectum
48 chr2:11356000-11366800 Weak transcription GM12878-XiMat blood
49 chr2:11356200-11363200 Weak transcription iPS-18 Cell Line embryonic stem cell
50 chr2:11356200-11363800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015