The 2.0 version of rSNPBase

Variant report

Variant rs212419
Chromosome Location chr7:105495557-105495558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105465400-105506600 Weak transcription Fetal Intestine Large intestine
2 chr7:105479600-105506200 Weak transcription Duodenum Mucosa Duodenum
3 chr7:105480000-105515600 Weak transcription Ovary ovary
4 chr7:105482200-105506400 Weak transcription Psoas Muscle Psoas
5 chr7:105483000-105506400 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr7:105485200-105502400 Weak transcription Hela-S3 cervix
7 chr7:105488000-105515600 Weak transcription Aorta Aorta
8 chr7:105489600-105497600 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr7:105489800-105506600 Weak transcription Primary monocytes fromperipheralblood blood
10 chr7:105490200-105515600 Weak transcription Gastric stomach
11 chr7:105490200-105516200 Weak transcription Thymus Thymus
12 chr7:105490800-105509200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr7:105491000-105511600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr7:105491200-105495600 Weak transcription Esophagus oesophagus
15 chr7:105491200-105499400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr7:105491200-105503600 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr7:105491600-105497200 Weak transcription HepG2 liver
18 chr7:105491600-105497400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr7:105491600-105511600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr7:105491600-105515200 Weak transcription Spleen Spleen
21 chr7:105491800-105501400 Weak transcription Pancreas Pancrea
22 chr7:105491800-105503200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr7:105491800-105515400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr7:105492200-105497600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr7:105492200-105501400 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr7:105492600-105502000 Weak transcription H9 Cell Line embryonic stem cell
27 chr7:105492800-105515800 Weak transcription A549 lung
28 chr7:105493000-105502600 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr7:105493000-105506400 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr7:105493200-105497600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr7:105493200-105501200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr7:105493200-105516400 Weak transcription Lung lung
33 chr7:105493400-105495800 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr7:105493400-105497200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr7:105493600-105497400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr7:105494000-105495600 Enhancers Primary T regulatory cells fromperipheralblood blood
37 chr7:105494000-105495600 Enhancers NHLF lung
38 chr7:105494400-105495800 Enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr7:105494400-105496000 Enhancers Primary T cells from cord blood blood
40 chr7:105494600-105496600 Enhancers Primary T helper naive cells from peripheral blood blood
41 chr7:105494600-105514000 Weak transcription Placenta Placenta
42 chr7:105494800-105495800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr7:105494800-105496200 Enhancers Cortex derived primary cultured neurospheres brain
44 chr7:105494800-105496400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr7:105494800-105501400 Weak transcription H1 Cell Line embryonic stem cell
46 chr7:105494800-105503000 Weak transcription Fetal Intestine Small intestine
47 chr7:105494800-105506400 Weak transcription Adipose Nuclei Adipose
48 chr7:105494800-105508600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr7:105494800-105510000 Weak transcription Small Intestine intestine
50 chr7:105494800-105515600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015