Variant report

Variant rs2129590
Chromosome Location chr12:32426389-32426390
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:32413400-32437600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr12:32418400-32426400 Weak transcription Fetal Muscle Leg muscle
3 chr12:32418600-32428400 Weak transcription Ovary ovary
4 chr12:32419200-32426600 Weak transcription Dnd41 blood
5 chr12:32422200-32427400 Enhancers Cortex derived primary cultured neurospheres brain
6 chr12:32423400-32427000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr12:32423600-32427200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr12:32423600-32427200 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr12:32423600-32427400 Enhancers Primary B cells from peripheral blood blood
10 chr12:32423800-32427200 Enhancers Fetal Intestine Large intestine
11 chr12:32423800-32427800 Enhancers Primary hematopoietic stem cells blood
12 chr12:32424000-32426400 Enhancers Rectal Smooth Muscle rectum
13 chr12:32424000-32427000 Enhancers Fetal Brain Female brain
14 chr12:32424000-32427200 Enhancers Fetal Intestine Small intestine
15 chr12:32424400-32426400 Weak transcription H1 Cell Line embryonic stem cell
16 chr12:32424400-32426400 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr12:32424400-32426800 Weak transcription Right Atrium heart
18 chr12:32424400-32434200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr12:32424600-32426800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr12:32424600-32438000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
21 chr12:32424800-32426400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr12:32424800-32426400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr12:32424800-32427400 Weak transcription HSMMtube muscle
24 chr12:32424800-32427800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr12:32425000-32426400 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr12:32425000-32426400 Enhancers HUVEC blood vessel
27 chr12:32425000-32433600 Weak transcription HSMM muscle
28 chr12:32425000-32437800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr12:32425200-32427200 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr12:32425400-32427200 Flanking Active TSS GM12878-XiMat blood
31 chr12:32425600-32426400 Enhancers Colon Smooth Muscle Colon
32 chr12:32425600-32426600 Enhancers Osteobl bone
33 chr12:32425600-32426800 Enhancers Primary T regulatory cells fromperipheralblood blood
34 chr12:32425600-32426800 Enhancers Primary mononuclear cells fromperipheralblood Blood
35 chr12:32425600-32426800 Enhancers Fetal Kidney kidney
36 chr12:32425600-32427000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr12:32425600-32427200 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr12:32425600-32427200 Enhancers Fetal Thymus thymus
39 chr12:32425600-32427200 Enhancers Thymus Thymus
40 chr12:32425600-32427400 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr12:32425800-32426400 Flanking Active TSS Primary T cells from cord blood blood
42 chr12:32425800-32426400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr12:32425800-32426400 Flanking Active TSS A549 lung
44 chr12:32425800-32426800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr12:32425800-32426800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr12:32425800-32426800 Enhancers Brain Hippocampus Middle brain
47 chr12:32425800-32427400 Enhancers Primary T helper cells fromperipheralblood blood
48 chr12:32426000-32426400 Enhancers Pancreas Pancrea
49 chr12:32426000-32426600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
50 chr12:32426000-32426600 Enhancers Brain Cingulate Gyrus brain

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