The 2.0 version of rSNPBase

Variant report

Variant rs2130693
Chromosome Location chr4:106330281-106330282
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106253800-106343000 Weak transcription Psoas Muscle Psoas
2 chr4:106274800-106330400 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr4:106279000-106339600 Weak transcription HSMMtube muscle
4 chr4:106279000-106347400 Weak transcription Rectal Smooth Muscle rectum
5 chr4:106280000-106344600 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr4:106282600-106335600 Weak transcription Brain Cingulate Gyrus brain
7 chr4:106287000-106335800 Weak transcription Colonic Mucosa Colon
8 chr4:106287600-106335600 Weak transcription Esophagus oesophagus
9 chr4:106287600-106357000 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr4:106287800-106335400 Weak transcription Spleen Spleen
11 chr4:106287800-106335800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:106287800-106347600 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr4:106288600-106335400 Weak transcription Thymus Thymus
14 chr4:106289600-106335400 Weak transcription Brain Anterior Caudate brain
15 chr4:106290000-106347400 Weak transcription Fetal Kidney kidney
16 chr4:106290800-106345800 Weak transcription K562 blood
17 chr4:106304400-106330400 Weak transcription Fetal Stomach stomach
18 chr4:106304400-106335600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr4:106306400-106335200 Weak transcription Placenta Placenta
20 chr4:106306400-106335400 Weak transcription Fetal Muscle Trunk muscle
21 chr4:106306400-106335400 Weak transcription Stomach Smooth Muscle stomach
22 chr4:106308400-106335800 Weak transcription Brain Hippocampus Middle brain
23 chr4:106309400-106351000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr4:106312400-106335600 Weak transcription Ovary ovary
25 chr4:106314600-106335600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr4:106315600-106335400 Weak transcription Pancreas Pancrea
27 chr4:106317600-106336000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr4:106320800-106335600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr4:106320800-106335600 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr4:106320800-106342800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr4:106320800-106342800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr4:106321000-106343600 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr4:106321000-106346000 Weak transcription Hela-S3 cervix
34 chr4:106321200-106335600 Weak transcription Left Ventricle heart
35 chr4:106321400-106367200 Weak transcription HUVEC blood vessel
36 chr4:106321600-106341800 Weak transcription NH-A brain
37 chr4:106321600-106356200 Weak transcription Muscle Satellite Cultured Cells --
38 chr4:106321800-106335600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr4:106321800-106353600 Weak transcription HMEC breast
40 chr4:106323600-106372800 Weak transcription Stomach Mucosa stomach
41 chr4:106324200-106347000 Weak transcription Fetal Lung lung
42 chr4:106325000-106330800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr4:106325600-106330600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr4:106326000-106335400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr4:106326000-106339800 Weak transcription Brain Angular Gyrus brain
46 chr4:106326000-106356400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr4:106326000-106356600 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr4:106326000-106363200 Weak transcription Colon Smooth Muscle Colon
49 chr4:106326200-106331000 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr4:106326200-106335600 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015