Variant report

Variant rs213165
Chromosome Location chr15:57239248-57239249
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57212400-57256000 Weak transcription Pancreas Pancrea
2 chr15:57212600-57241000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr15:57213200-57256000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr15:57216400-57241800 Weak transcription Fetal Brain Male brain
5 chr15:57222600-57250200 Weak transcription NH-A brain
6 chr15:57222800-57240800 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr15:57222800-57255000 Weak transcription HMEC breast
8 chr15:57223200-57240400 Weak transcription Aorta Aorta
9 chr15:57224600-57248600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr15:57225000-57239400 Weak transcription Left Ventricle heart
11 chr15:57225000-57244200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr15:57225000-57249000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr15:57226400-57242000 Weak transcription HUVEC blood vessel
14 chr15:57227000-57249800 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr15:57227600-57260600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr15:57228000-57242400 Weak transcription Fetal Intestine Small intestine
17 chr15:57228200-57260600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr15:57229400-57255800 Weak transcription Fetal Stomach stomach
19 chr15:57231200-57240800 Weak transcription HUES48 Cell Line embryonic stem cell
20 chr15:57232000-57256000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr15:57232200-57240000 Weak transcription NHLF lung
22 chr15:57233000-57250200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr15:57233800-57239400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr15:57233800-57242000 Weak transcription Ovary ovary
25 chr15:57234200-57240800 Weak transcription H9 Cell Line embryonic stem cell
26 chr15:57234400-57249000 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr15:57235200-57239400 Weak transcription Thymus Thymus
28 chr15:57236000-57239800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr15:57236200-57239800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr15:57236200-57240400 Weak transcription Osteobl bone
31 chr15:57236800-57249800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr15:57237000-57239400 Weak transcription Brain Angular Gyrus brain
33 chr15:57237000-57242000 Weak transcription Brain Anterior Caudate brain
34 chr15:57237200-57240400 Weak transcription Muscle Satellite Cultured Cells --
35 chr15:57237200-57241800 Weak transcription Fetal Heart heart
36 chr15:57237600-57239600 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
37 chr15:57238200-57239600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr15:57238200-57240400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr15:57238200-57240600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr15:57238200-57240600 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr15:57238200-57240800 Weak transcription Fetal Lung lung
42 chr15:57238200-57240800 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr15:57238200-57249000 Weak transcription HSMM muscle
44 chr15:57238400-57239600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr15:57238400-57239800 Weak transcription Dnd41 blood
46 chr15:57238400-57240600 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr15:57238400-57240800 Weak transcription Adipose Nuclei Adipose
48 chr15:57238400-57241200 Weak transcription Fetal Kidney kidney
49 chr15:57238400-57241600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr15:57238400-57242800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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