Variant report

Variant	rs2136124
Chromosome Location	chr11:92821338-92821339
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7939730	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv555903	chr11:92640787-92877533	Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv555904	chr11:92640787-92881933	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv526546	chr11:92742186-92851178	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1039134	chr11:92790000-93219942	Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:92817200-92827800	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr11:92817800-92823000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr11:92818800-92824000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:92819000-92822400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:92819000-92822400	Weak transcription	NHDF-Ad	bronchial
6	chr11:92819000-92822600	Weak transcription	Osteobl	bone
7	chr11:92820000-92822600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr11:92820200-92822000	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr11:92820200-92822400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr11:92820400-92822400	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr11:92820600-92822000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr11:92820600-92822400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr11:92820800-92822400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
14	chr11:92821200-92821400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr11:92821200-92821400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr11:92821200-92822200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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