Variant report

Variant rs2139512
Chromosome Location chr4:57276619-57276620
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57254600-57280200 Weak transcription Placenta Amnion Placenta Amnion
2 chr4:57254800-57287600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr4:57264200-57290200 Weak transcription Esophagus oesophagus
4 chr4:57264800-57301000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr4:57265000-57301000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:57267800-57277600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr4:57267800-57278400 Weak transcription Placenta Placenta
8 chr4:57270200-57276800 Weak transcription Colonic Mucosa Colon
9 chr4:57272600-57280200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr4:57272800-57280400 Weak transcription H9 Cell Line embryonic stem cell
11 chr4:57272800-57281600 Weak transcription Primary T cells fromperipheralblood blood
12 chr4:57272800-57292600 Weak transcription Primary hematopoietic stem cells blood
13 chr4:57272800-57299800 Weak transcription Primary T cells from cord blood blood
14 chr4:57272800-57299800 Weak transcription Fetal Thymus thymus
15 chr4:57272800-57300000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
16 chr4:57273000-57276800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr4:57273200-57276800 Weak transcription Hela-S3 cervix
18 chr4:57274000-57287000 Weak transcription H1 Cell Line embryonic stem cell
19 chr4:57274000-57290600 Weak transcription GM12878-XiMat blood
20 chr4:57274200-57276800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr4:57274200-57287000 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr4:57274200-57296400 Weak transcription Dnd41 blood
23 chr4:57275000-57278200 Enhancers iPS-15b Cell Line embryonic stem cell
24 chr4:57275000-57278400 Enhancers HUES48 Cell Line embryonic stem cell
25 chr4:57275200-57278000 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr4:57275400-57277800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr4:57275400-57278200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr4:57275400-57278200 Enhancers NHDF-Ad bronchial
29 chr4:57275600-57277000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr4:57275600-57277600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr4:57276000-57277200 Flanking Active TSS HUVEC blood vessel
32 chr4:57276200-57276800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr4:57276200-57276800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr4:57276200-57276800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr4:57276200-57276800 Active TSS HMEC breast
36 chr4:57276200-57276800 Active TSS NHLF lung
37 chr4:57276200-57277000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr4:57276200-57277000 Enhancers Liver Liver
39 chr4:57276200-57277000 Active TSS Fetal Muscle Leg muscle
40 chr4:57276200-57277000 Active TSS Fetal Stomach stomach
41 chr4:57276200-57277000 Active TSS Stomach Smooth Muscle stomach
42 chr4:57276200-57277000 Flanking Active TSS NH-A brain
43 chr4:57276200-57277200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr4:57276200-57277200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr4:57276200-57277200 Active TSS Pancreatic Islets Pancreatic Islet
46 chr4:57276200-57277200 Flanking Active TSS Osteobl bone
47 chr4:57276200-57278000 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr4:57276200-57278000 Active TSS Brain Anterior Caudate brain
49 chr4:57276200-57280200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr4:57276400-57276800 Active TSS ES-I3 Cell Line embryonic stem cell

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